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The map label for this gene is yhcS [C]

Identifier: 134301296

GI number: 134301296

Start: 169580

End: 170209

Strand: Direct

Name: yhcS [C]

Synonym: FTW_0158

Alternate gene names: 134301296

Gene position: 169580-170209 (Clockwise)

Preceding gene: 134301295

Following gene: 134301297

Centisome position: 8.93

GC content: 26.67

Gene sequence:

>630_bases
ATGAGTAAAATTATTAAAGAAGTAGTTGATAAAAATGTAATTGAAGGAACTATATATTTTATATCTTTGGTTGAATTAGG
CTCATATACTGCTGTCAAGAATCTTTATTCTGTCGAGATTAATACAGTCAGAAGTAAGTTGGAATTATTAGAGAAATATT
TGGGTGTCAAGCTAGTACAGCCAAATAGTAATAAGATAGAGATAACCAGAGATGGCAAAAAATATTATGCATCTTGTCAT
AGATTATACACAGATTTAGAGAATAGTATTTTAAGTAGTAAATATAAAGGTATAGATAACCTTAAATATATTAGAATATT
TGGAACACGAGCTTTTATTGATTTTATTTCCCCAAAGATACATCAGGTTGATGAAAGTGGCAAATATACTTTTACATTTG
ATAGTTATTTTCTATATCAAGTAAATAATTATTTTTATCAACTAAGTAATTATGATGTCGCAATAGTAACTTCTAAAGAT
TTGGAGAAAATAGATCAAGATCGCTGGATTATTGCTGCGAATATTGATGGAACAAAAATACCTTCAAGGATTTATGTTAA
TCGAGATGTTTATATTGAGTATAACCTAGAAAATGAACCAAACAATATATTTATAATGTTCCTTTTATAA

Upstream 100 bases:

>100_bases
AGTTCGAGTCTCGCTCAGTGCACCAAATTTTTATAAAGTTCCAAATATGTATTTTTACTGATATTATTATAAATAATAAT
GTAAGTTTTTTATCTAATAT

Downstream 100 bases:

>100_bases
TTCGTAGAGATAGCAGTGACTATAATCTGACTATTAATATTGATGGCAATCAATTGACTCCTTCATTAAAGCATATAAGA
TATATTGTTGAAGATGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: LysR Family Transcriptional Regulator

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSKIIKEVVDKNVIEGTIYFISLVELGSYTAVKNLYSVEINTVRSKLELLEKYLGVKLVQPNSNKIEITRDGKKYYASCH
RLYTDLENSILSSKYKGIDNLKYIRIFGTRAFIDFISPKIHQVDESGKYTFTFDSYFLYQVNNYFYQLSNYDVAIVTSKD
LEKIDQDRWIIAANIDGTKIPSRIYVNRDVYIEYNLENEPNNIFIMFLL

Sequences:

>Translated_209_residues
MSKIIKEVVDKNVIEGTIYFISLVELGSYTAVKNLYSVEINTVRSKLELLEKYLGVKLVQPNSNKIEITRDGKKYYASCH
RLYTDLENSILSSKYKGIDNLKYIRIFGTRAFIDFISPKIHQVDESGKYTFTFDSYFLYQVNNYFYQLSNYDVAIVTSKD
LEKIDQDRWIIAANIDGTKIPSRIYVNRDVYIEYNLENEPNNIFIMFLL
>Mature_208_residues
SKIIKEVVDKNVIEGTIYFISLVELGSYTAVKNLYSVEINTVRSKLELLEKYLGVKLVQPNSNKIEITRDGKKYYASCHR
LYTDLENSILSSKYKGIDNLKYIRIFGTRAFIDFISPKIHQVDESGKYTFTFDSYFLYQVNNYFYQLSNYDVAIVTSKDL
EKIDQDRWIIAANIDGTKIPSRIYVNRDVYIEYNLENEPNNIFIMFLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24479; Mature: 24348

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIIKEVVDKNVIEGTIYFISLVELGSYTAVKNLYSVEINTVRSKLELLEKYLGVKLVQ
CHHHHHHHHCCHHHHHHEEEEEEEHHCCHHHHHHEEEEEHHHHHHHHHHHHHHHCEEEEC
PNSNKIEITRDGKKYYASCHRLYTDLENSILSSKYKGIDNLKYIRIFGTRAFIDFISPKI
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHCCHH
HQVDESGKYTFTFDSYFLYQVNNYFYQLSNYDVAIVTSKDLEKIDQDRWIIAANIDGTKI
EECCCCCCEEEEECCEEEEEEEEEEEEECCCCEEEEECHHHHHCCCCCEEEEEECCCCCC
PSRIYVNRDVYIEYNLENEPNNIFIMFLL
CCEEEEECEEEEEEECCCCCCCEEEEEEC
>Mature Secondary Structure 
SKIIKEVVDKNVIEGTIYFISLVELGSYTAVKNLYSVEINTVRSKLELLEKYLGVKLVQ
HHHHHHHHCCHHHHHHEEEEEEEHHCCHHHHHHEEEEEHHHHHHHHHHHHHHHCEEEEC
PNSNKIEITRDGKKYYASCHRLYTDLENSILSSKYKGIDNLKYIRIFGTRAFIDFISPKI
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHHHCCHH
HQVDESGKYTFTFDSYFLYQVNNYFYQLSNYDVAIVTSKDLEKIDQDRWIIAANIDGTKI
EECCCCCCEEEEECCEEEEEEEEEEEEECCCCEEEEECHHHHHCCCCCEEEEEECCCCCC
PSRIYVNRDVYIEYNLENEPNNIFIMFLL
CCEEEEECEEEEEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA