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The map label for this gene is rimP

Identifier: 134301262

GI number: 134301262

Start: 133632

End: 134084

Strand: Direct

Name: rimP

Synonym: FTW_0124

Alternate gene names: 134301262

Gene position: 133632-134084 (Clockwise)

Preceding gene: 134301261

Following gene: 134301263

Centisome position: 7.04

GC content: 35.32

Gene sequence:

>453_bases
ATGTTGCTAGACGATTTATATGAGATAGTAGAACCCATCACAGCTGATCTAGGCTATATTTTATGGGGAATTGAAGTTGT
AGGAAGTGGTAAACTTACCATACGTATTTTTATTGATCATGAGAATGGTGTTTCAGTTGATGATTGCCAAATAGTTAGTA
AAGAAATCAGTGCAGTTTTTGATGTTGAGGATCCAGTTTCAGGTAAATATATTCTTGAAGTTTCTTCACCTGGGATGAAT
CGCCAAATTTTTAATATAATTCAGGCGCAAGCTCTGGTAGGATTTAATGTAAAGGCGGTTACTTTGGCTCCAGTTGGATC
ACAAACTAAGTTTAAGGGCGTGCTAGAAAGAGTAGAAGGAAACAATGTCATTCTAAACTTGGAAGATGGTAAAGAAATAA
GTTTTGATTTTGACGAGCTTAAAAAACTAAGGGTATCACCTGATTTTAGTTAG

Upstream 100 bases:

>100_bases
GGTTCAAATCCTGCCCCCGCTACCAAATAGGAATTTTTTATAAAGGCCCTTTAAGGGCCTTTTTGCTATCTGAAGGGTAT
GCAAAATCTAAGGGGTGAAA

Downstream 100 bases:

>100_bases
ATAGAGGAATTTAAAATATGAGCAAAGAATTATTGTTAGTATTAGAAACTGTAGCAAATGAAAAAGATATCTCAAAAGAT
CTTTTATTTGAAGCTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENGVSVDDCQIVSKEISAVFDVEDPVSGKYILEVSSPGMN
RQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEGNNVILNLEDGKEISFDFDELKKLRVSPDFS

Sequences:

>Translated_150_residues
MLLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENGVSVDDCQIVSKEISAVFDVEDPVSGKYILEVSSPGMN
RQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEGNNVILNLEDGKEISFDFDELKKLRVSPDFS
>Mature_150_residues
MLLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENGVSVDDCQIVSKEISAVFDVEDPVSGKYILEVSSPGMN
RQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEGNNVILNLEDGKEISFDFDELKKLRVSPDFS

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=141, Percent_Identity=40.4255319148936, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_FRAT1 (Q14K22)

Other databases:

- EMBL:   AM286280
- RefSeq:   YP_666254.1
- ProteinModelPortal:   Q14K22
- SMR:   Q14K22
- STRING:   Q14K22
- GeneID:   4199153
- GenomeReviews:   AM286280_GR
- KEGG:   ftf:FTF0048
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- PhylomeDB:   Q14K22
- ProtClustDB:   PRK14633
- BioCyc:   FTUL393115:FTF0048-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 16547; Mature: 16547

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENGVSVDDCQIVSKEISAVF
CCHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHEEE
DVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEG
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCC
NNVILNLEDGKEISFDFDELKKLRVSPDFS
CEEEEEECCCCEEEECHHHHHEECCCCCCC
>Mature Secondary Structure
MLLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENGVSVDDCQIVSKEISAVF
CCHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHEEE
DVEDPVSGKYILEVSSPGMNRQIFNIIQAQALVGFNVKAVTLAPVGSQTKFKGVLERVEG
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCC
NNVILNLEDGKEISFDFDELKKLRVSPDFS
CEEEEEECCCCEEEECHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA