Click here to switch to the map view.

The map label for this gene is iglA1

Identifier: 134301194

GI number: 134301194

Start: 34043

End: 34597

Strand: Direct

Name: iglA1

Synonym: FTW_0038

Alternate gene names: NA

Gene position: 34043-34597 (Clockwise)

Preceding gene: 134301193

Following gene: 134301195

Centisome position: 1.79

GC content: 32.25

Gene sequence:

>555_bases
ATGGCAAAAAATAAAATCCCAAATTCAAGGTTGATGATAAATTATGAAACTAATGTTGATGGTGTCTTAAAGAAAAAAGA
GCTACCTTACAGAGTCCTAGTTGTTGGCGATTTATCAAAAGGAAGATCTGTGGATGCAAAAAAAGAGTTCGCAGATAGAG
AGGTCAGAAGAGTAAATAATGGTGTTGATAGGGTTTTAGAAGAGATGAATATATCTTTTGATTTTGAGGCACCAAACTTT
GTTTCTAAAGATCGTAGTAATTTAAAAGTTAATTATAGAATTGAAAGTGTCAAAGATTTTAGACCTGATGCTGTTGCTAA
AAAAGTTCCTGAAATCAGAGCGCTGCTTGAAATGAAAGAGATATTAGCATCCTTTGCTAAGGACATTGAAAATAATCGTA
ATCTCAAGAAAACCATAGATATGATTTTTTCAGATAGTAACGAATTAGAATCATTAAAGAGTAAGATTCCTGCTTTGACA
AATTATACGATTAAAGACTCTTGTGATGCTGCTGAGTCTCAAGACTTAAGTAATCAACAAGTAGATGGTAAGTAG

Upstream 100 bases:

>100_bases
GACCAATGATCTGGGTTTAAATTTAGCTGTATAAACATTGTGTTATTGGCGTTGTTAAGGTAACTTGCTTATAAGGTGTT
GTGAAAAAAAGGACAATAAG

Downstream 100 bases:

>100_bases
GGAGGATTTTATTATGACAATAAATAAATTAAGTCTCACTGATGAACTTTTAAATAATTTTGGGGGATCTACAGAAGTTG
ATAGTGTACTCAAAAATATA

Product: intracellular growth locus, igl A

Products: NA

Alternate protein names: Intracellular Growth Locus Subunit A; Cytoplasmic Protein; Conserved Protein; Type VI Secretion System Protein ImpB; Intracellular Growth Locus Protein IglA; Protein ImpB; Type VI Secretion

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAKNKIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVNNGVDRVLEEMNISFDFEAPNF
VSKDRSNLKVNYRIESVKDFRPDAVAKKVPEIRALLEMKEILASFAKDIENNRNLKKTIDMIFSDSNELESLKSKIPALT
NYTIKDSCDAAESQDLSNQQVDGK

Sequences:

>Translated_184_residues
MAKNKIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVNNGVDRVLEEMNISFDFEAPNF
VSKDRSNLKVNYRIESVKDFRPDAVAKKVPEIRALLEMKEILASFAKDIENNRNLKKTIDMIFSDSNELESLKSKIPALT
NYTIKDSCDAAESQDLSNQQVDGK
>Mature_183_residues
AKNKIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVNNGVDRVLEEMNISFDFEAPNFV
SKDRSNLKVNYRIESVKDFRPDAVAKKVPEIRALLEMKEILASFAKDIENNRNLKKTIDMIFSDSNELESLKSKIPALTN
YTIKDSCDAAESQDLSNQQVDGK

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20974; Mature: 20843

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVNN
CCCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
GVDRVLEEMNISFDFEAPNFVSKDRSNLKVNYRIESVKDFRPDAVAKKVPEIRALLEMKE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHH
ILASFAKDIENNRNLKKTIDMIFSDSNELESLKSKIPALTNYTIKDSCDAAESQDLSNQQ
HHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCCCC
VDGK
CCCC
>Mature Secondary Structure 
AKNKIPNSRLMINYETNVDGVLKKKELPYRVLVVGDLSKGRSVDAKKEFADREVRRVNN
CCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
GVDRVLEEMNISFDFEAPNFVSKDRSNLKVNYRIESVKDFRPDAVAKKVPEIRALLEMKE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHH
ILASFAKDIENNRNLKKTIDMIFSDSNELESLKSKIPALTNYTIKDSCDAAESQDLSNQQ
HHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCCCCC
VDGK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA