| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300457
Identifier: 134300457
GI number: 134300457
Start: 2843200
End: 2843844
Strand: Reverse
Name: 134300457
Synonym: Dred_2618
Alternate gene names: NA
Gene position: 2843844-2843200 (Counterclockwise)
Preceding gene: 134300458
Following gene: 134300456
Centisome position: 78.82
GC content: 47.44
Gene sequence:
>645_bases TTGAAGAGTATTGCAGCGAAACTAGTCCAAGTGGCTAAAGCCTGCGAATATGTACAAAAAGATTCTACCAATAAGGAGCA AAAATATAAGTATGTTTCAGCTGCCGCTATTCTTGGCAAAGTTAACGATGCCCTGGTGCAGGCCAATATGGCTAGTGTGC CGGAGTTTTCAATCCTGTCAGAAAAAGAAAAATCCACTTCCCGGGGTGGCGTATGGCAGCTTGTAACCGTTCAGTGCAAG TTAACCATCATTGATGCCGATTCCGGCGAATCAGTAACCGTCACCAGTTTGGGTACCGGTACAGATCCGGGTGACAAGGC AGTCGCTAAGGCCCAAACCATGGCCCTTAAGTACGCTTGGTTGACAGCTTTGAATATTGAAACCGGGGATAATCCCGAAG CCGACAGTAATACTGATAAAACCGAATTCACCAACCAAGGGCAACAACCAGCAGTAGCCCCCTTACCAAACACACCCAGA GTGCAGGAGCTTGTCGGCCTCTGGCATCAACTAGGATGGGATGTGAATTCCCTGCCAAATTATCTGCAACAGCGTTACCA TAAACCAGCTAACCAACTAACAGACCCAGAGTTGGCAACCATGGTCAGCGAAGCACAAGGATACTTACAACAAAGGATGG TGTAA
Upstream 100 bases:
>100_bases GATAAGAAAGCAATATTAGACGATATAAAGCGTGGGGCTGAAGTTCCCGGTGCTGAGATCCACCAGGGTTATCACATTCG GATTCAGTGAGGTGGGCTAA
Downstream 100 bases:
>100_bases ATATGAACTCTGTCAACATTATTGGTCGCTTAACCCGTGACCCAGAACTAAGATATACCCAGAATGGTAAAGCGGTAACC AATATGTCTATCGCTGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MKSIAAKLVQVAKACEYVQKDSTNKEQKYKYVSAAAILGKVNDALVQANMASVPEFSILSEKEKSTSRGGVWQLVTVQCK LTIIDADSGESVTVTSLGTGTDPGDKAVAKAQTMALKYAWLTALNIETGDNPEADSNTDKTEFTNQGQQPAVAPLPNTPR VQELVGLWHQLGWDVNSLPNYLQQRYHKPANQLTDPELATMVSEAQGYLQQRMV
Sequences:
>Translated_214_residues MKSIAAKLVQVAKACEYVQKDSTNKEQKYKYVSAAAILGKVNDALVQANMASVPEFSILSEKEKSTSRGGVWQLVTVQCK LTIIDADSGESVTVTSLGTGTDPGDKAVAKAQTMALKYAWLTALNIETGDNPEADSNTDKTEFTNQGQQPAVAPLPNTPR VQELVGLWHQLGWDVNSLPNYLQQRYHKPANQLTDPELATMVSEAQGYLQQRMV >Mature_214_residues MKSIAAKLVQVAKACEYVQKDSTNKEQKYKYVSAAAILGKVNDALVQANMASVPEFSILSEKEKSTSRGGVWQLVTVQCK LTIIDADSGESVTVTSLGTGTDPGDKAVAKAQTMALKYAWLTALNIETGDNPEADSNTDKTEFTNQGQQPAVAPLPNTPR VQELVGLWHQLGWDVNSLPNYLQQRYHKPANQLTDPELATMVSEAQGYLQQRMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23330; Mature: 23330
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIAAKLVQVAKACEYVQKDSTNKEQKYKYVSAAAILGKVNDALVQANMASVPEFSILS CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EKEKSTSRGGVWQLVTVQCKLTIIDADSGESVTVTSLGTGTDPGDKAVAKAQTMALKYAW HHHHCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH LTALNIETGDNPEADSNTDKTEFTNQGQQPAVAPLPNTPRVQELVGLWHQLGWDVNSLPN HEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH YLQQRYHKPANQLTDPELATMVSEAQGYLQQRMV HHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSIAAKLVQVAKACEYVQKDSTNKEQKYKYVSAAAILGKVNDALVQANMASVPEFSILS CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EKEKSTSRGGVWQLVTVQCKLTIIDADSGESVTVTSLGTGTDPGDKAVAKAQTMALKYAW HHHHCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH LTALNIETGDNPEADSNTDKTEFTNQGQQPAVAPLPNTPRVQELVGLWHQLGWDVNSLPN HEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH YLQQRYHKPANQLTDPELATMVSEAQGYLQQRMV HHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA