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The map label for this gene is ymfN [C]

Identifier: 134300446

GI number: 134300446

Start: 2831473

End: 2833149

Strand: Reverse

Name: ymfN [C]

Synonym: Dred_2607

Alternate gene names: 134300446

Gene position: 2833149-2831473 (Counterclockwise)

Preceding gene: 134300447

Following gene: 134300445

Centisome position: 78.52

GC content: 43.11

Gene sequence:

>1677_bases
ATGATGACGATGAGGAAATGTAACTATCATCCTTACATCGATGCATACATGGATACGATCCGGTCTGGTGGTGTCCCGGC
TAGTAAAGACTTACTGCAGGCTATGGACTATGTTGAATTTAAGCTTAGCGATCCTGACGTGTTTATCGATACCGAAAAGA
TTGACAAAGCTATCGAGCTTATGGAGCGGTATTTTGAAGTTAAACTGCTTGACTGGGAATTATTCGTTACAGCTCTAATT
CACTGCTACTACAAGTCAAATGATACGGTAGTATTCAGCACCATCTTTATTATGATGGGGCGTGGCAATGGCAAGAATGG
GTTTATCTCACCAGTCGCATGGTATCTAACAACCCACTATCATGGGGTAAAAGGTTACAATATAGACATCGTTGCTAACG
CTGAGGACCAGGCCAAAACATCATTCAATGATGTATATGAAGTACTCGAAAGAACCTGGAAAAAATCGAAGAAGTTTTTT
TACAAGTCTAAGGAAGTTATCGTAAATACCAAGACAAATTCCTACATTAAGTTCAATACATCTAATGCCAAAACAAAAGA
CAGTAAGCGTACCGGCTGCCTGATCTTTGACGAGGTTCACGGGTACGAAACATACGATAACATCAAGGTATTTACCTCCG
GCTTTGGAAAGCGCAAGCATTCCAGAGCTTTTTATATTACTACGAATGGTAATGTTCGTGAGGGCGTTCTTGATGACATG
CTAGCTATTGCTGCTGATATACTCAACGGGACAATTAAGGACTTGGGGTGGCTACCTTTAATCTACAGAATTGACAGTGA
GGAAGAGGCACTTGACCCGAATATGTGGCATAAGGCGAATCCTTCTCTGAGGTTTTTCCCGGAACTTCAAAAGGAAATGC
AAAATGAATTTATCGAGATGAAGTACAAGCCTGCCATAGAGGAGGAATTCTACACCAAGCGGCTTAACTGGCCGAGGCAA
AACCGGGAAATTATTGTCACCGAATGGGATAATATCAAGGCAACAAATAAACCACTTCCGGATTTATCCTACAGGACATG
CGTCGCTGGAATAGACTACTCCAAAATAACTGACTTCGCAAGTGTGAACCTTCATTTCCGTGAGGGAGATATTCGGTATG
ACATCAACCATTCGTGGCTTTGCTTAAATTCAGCCGACCTTCCAAGGCTGAAAATACCCTGGCGAGAATGGGCCCAGCAG
GGGTATCTTACCCTGGTCGATGATGTGGAAATATCCCCAGACCTGATCGTTAACTGGCTTGCCGAGAAGGCTACGAAATA
TAACATAATCAAGTTGGCGTTAGATAACTTTCGCTATGCCCTGCTAGCTACTAGCCTAAAGCGAATTGGCTTTGATGCTA
AAGATAATAAAAATGTTAAACTTGTTCGTCCATCCGATATCATGGCGATTGTGCCGGTGATTGATAGCTGCTTTGCGAAC
CAAAATTTTGTGTGGGGAGATAACCCACCACTGCGATGGGCCACGAATAATACAAAGAAAATTGCCTCTGGGAAAAAGCA
GGGGACTGACACTGGGAACTTTTACTATGGCAAGATTGAGGCTAAGAGCCGAAAGACAGACCCATTCATGGCTTTGGTAG
CTGCCATGACTATTGAAAGTGAACTGGGTGACGGTTATTGCGGTGAGACACCTGATGTTGGTGTGTATGTTTACTAG

Upstream 100 bases:

>100_bases
AAGAAAAACGACTCCATTGCCGAACTCAACAAGACTAACGCTCAGATGCTGAAAATCCTAAACGAGCTAGGGTTGAAAGC
CAACAGCTCAGGATCGGGCG

Downstream 100 bases:

>100_bases
AGAGGGGGTGGGAATTTGGGACTAATATCATGGCTCGTAAATAGAATCAGTGGAGATCCTGAACCAACAGAGTTAGAGAT
TGAAGAATTTTTTAATCTGC

Product: phage terminase

Products: NA

Alternate protein names: Terminase; Phage Terminase; Terminase Large Subunit; Prophage; Phage Terminase-Like Protein Large Subunit; Phage Terminase-Like Protein; Prophage LambdaSa; Phage-Terminase Large Subunit; Prophage Lp3 Terminase Large Subunit; Terminase Large Subunit / Phage Terminase; Phage Large Terminase Subunit; Bacteriophage Terminase-Like Protein Large Subunit; Large Subunit Phage Terminase; Prophage LambdaSa2 Terminase Large Subunit; Phage Related Terminase Large Sub-Unit; Phage-Related Terminase

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MMTMRKCNYHPYIDAYMDTIRSGGVPASKDLLQAMDYVEFKLSDPDVFIDTEKIDKAIELMERYFEVKLLDWELFVTALI
HCYYKSNDTVVFSTIFIMMGRGNGKNGFISPVAWYLTTHYHGVKGYNIDIVANAEDQAKTSFNDVYEVLERTWKKSKKFF
YKSKEVIVNTKTNSYIKFNTSNAKTKDSKRTGCLIFDEVHGYETYDNIKVFTSGFGKRKHSRAFYITTNGNVREGVLDDM
LAIAADILNGTIKDLGWLPLIYRIDSEEEALDPNMWHKANPSLRFFPELQKEMQNEFIEMKYKPAIEEEFYTKRLNWPRQ
NREIIVTEWDNIKATNKPLPDLSYRTCVAGIDYSKITDFASVNLHFREGDIRYDINHSWLCLNSADLPRLKIPWREWAQQ
GYLTLVDDVEISPDLIVNWLAEKATKYNIIKLALDNFRYALLATSLKRIGFDAKDNKNVKLVRPSDIMAIVPVIDSCFAN
QNFVWGDNPPLRWATNNTKKIASGKKQGTDTGNFYYGKIEAKSRKTDPFMALVAAMTIESELGDGYCGETPDVGVYVY

Sequences:

>Translated_558_residues
MMTMRKCNYHPYIDAYMDTIRSGGVPASKDLLQAMDYVEFKLSDPDVFIDTEKIDKAIELMERYFEVKLLDWELFVTALI
HCYYKSNDTVVFSTIFIMMGRGNGKNGFISPVAWYLTTHYHGVKGYNIDIVANAEDQAKTSFNDVYEVLERTWKKSKKFF
YKSKEVIVNTKTNSYIKFNTSNAKTKDSKRTGCLIFDEVHGYETYDNIKVFTSGFGKRKHSRAFYITTNGNVREGVLDDM
LAIAADILNGTIKDLGWLPLIYRIDSEEEALDPNMWHKANPSLRFFPELQKEMQNEFIEMKYKPAIEEEFYTKRLNWPRQ
NREIIVTEWDNIKATNKPLPDLSYRTCVAGIDYSKITDFASVNLHFREGDIRYDINHSWLCLNSADLPRLKIPWREWAQQ
GYLTLVDDVEISPDLIVNWLAEKATKYNIIKLALDNFRYALLATSLKRIGFDAKDNKNVKLVRPSDIMAIVPVIDSCFAN
QNFVWGDNPPLRWATNNTKKIASGKKQGTDTGNFYYGKIEAKSRKTDPFMALVAAMTIESELGDGYCGETPDVGVYVY
>Mature_558_residues
MMTMRKCNYHPYIDAYMDTIRSGGVPASKDLLQAMDYVEFKLSDPDVFIDTEKIDKAIELMERYFEVKLLDWELFVTALI
HCYYKSNDTVVFSTIFIMMGRGNGKNGFISPVAWYLTTHYHGVKGYNIDIVANAEDQAKTSFNDVYEVLERTWKKSKKFF
YKSKEVIVNTKTNSYIKFNTSNAKTKDSKRTGCLIFDEVHGYETYDNIKVFTSGFGKRKHSRAFYITTNGNVREGVLDDM
LAIAADILNGTIKDLGWLPLIYRIDSEEEALDPNMWHKANPSLRFFPELQKEMQNEFIEMKYKPAIEEEFYTKRLNWPRQ
NREIIVTEWDNIKATNKPLPDLSYRTCVAGIDYSKITDFASVNLHFREGDIRYDINHSWLCLNSADLPRLKIPWREWAQQ
GYLTLVDDVEISPDLIVNWLAEKATKYNIIKLALDNFRYALLATSLKRIGFDAKDNKNVKLVRPSDIMAIVPVIDSCFAN
QNFVWGDNPPLRWATNNTKKIASGKKQGTDTGNFYYGKIEAKSRKTDPFMALVAAMTIESELGDGYCGETPDVGVYVY

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64382; Mature: 64382

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTMRKCNYHPYIDAYMDTIRSGGVPASKDLLQAMDYVEFKLSDPDVFIDTEKIDKAIEL
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCEEEEHHHHHHHHHH
MERYFEVKLLDWELFVTALIHCYYKSNDTVVFSTIFIMMGRGNGKNGFISPVAWYLTTHY
HHHHHEEEEEHHHHHHHHHHHHEECCCCEEEEEEEEEEEECCCCCCCCCCHHHEEHHHHC
HGVKGYNIDIVANAEDQAKTSFNDVYEVLERTWKKSKKFFYKSKEVIVNTKTNSYIKFNT
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCEEEEEC
SNAKTKDSKRTGCLIFDEVHGYETYDNIKVFTSGFGKRKHSRAFYITTNGNVREGVLDDM
CCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHH
LAIAADILNGTIKDLGWLPLIYRIDSEEEALDPNMWHKANPSLRFFPELQKEMQNEFIEM
HHHHHHHHCCHHHHCCCEEEEEEECCCHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHEE
KYKPAIEEEFYTKRLNWPRQNREIIVTEWDNIKATNKPLPDLSYRTCVAGIDYSKITDFA
ECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCCCCCHHHHEECCCHHHHCCEE
SVNLHFREGDIRYDINHSWLCLNSADLPRLKIPWREWAQQGYLTLVDDVEISPDLIVNWL
EEEEEEECCCEEEECCCCEEEECCCCCCEEECCHHHHHCCCCEEEEECCCCCHHHHHHHH
AEKATKYNIIKLALDNFRYALLATSLKRIGFDAKDNKNVKLVRPSDIMAIVPVIDSCFAN
HHHCCCEEEEEEEHHCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEHHHHHHHHHCC
QNFVWGDNPPLRWATNNTKKIASGKKQGTDTGNFYYGKIEAKSRKTDPFMALVAAMTIES
CCEEECCCCCEEEECCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
ELGDGYCGETPDVGVYVY
HCCCCCCCCCCCCCEEEC
>Mature Secondary Structure
MMTMRKCNYHPYIDAYMDTIRSGGVPASKDLLQAMDYVEFKLSDPDVFIDTEKIDKAIEL
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCEEEEHHHHHHHHHH
MERYFEVKLLDWELFVTALIHCYYKSNDTVVFSTIFIMMGRGNGKNGFISPVAWYLTTHY
HHHHHEEEEEHHHHHHHHHHHHEECCCCEEEEEEEEEEEECCCCCCCCCCHHHEEHHHHC
HGVKGYNIDIVANAEDQAKTSFNDVYEVLERTWKKSKKFFYKSKEVIVNTKTNSYIKFNT
CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCEEEEEC
SNAKTKDSKRTGCLIFDEVHGYETYDNIKVFTSGFGKRKHSRAFYITTNGNVREGVLDDM
CCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHH
LAIAADILNGTIKDLGWLPLIYRIDSEEEALDPNMWHKANPSLRFFPELQKEMQNEFIEM
HHHHHHHHCCHHHHCCCEEEEEEECCCHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHEE
KYKPAIEEEFYTKRLNWPRQNREIIVTEWDNIKATNKPLPDLSYRTCVAGIDYSKITDFA
ECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEECCCCCCCCCHHHHEECCCHHHHCCEE
SVNLHFREGDIRYDINHSWLCLNSADLPRLKIPWREWAQQGYLTLVDDVEISPDLIVNWL
EEEEEEECCCEEEECCCCEEEECCCCCCEEECCHHHHHCCCCEEEEECCCCCHHHHHHHH
AEKATKYNIIKLALDNFRYALLATSLKRIGFDAKDNKNVKLVRPSDIMAIVPVIDSCFAN
HHHCCCEEEEEEEHHCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEHHHHHHHHHCC
QNFVWGDNPPLRWATNNTKKIASGKKQGTDTGNFYYGKIEAKSRKTDPFMALVAAMTIES
CCEEECCCCCEEEECCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
ELGDGYCGETPDVGVYVY
HCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA