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The map label for this gene is ccpN [H]

Identifier: 134300310

GI number: 134300310

Start: 2693017

End: 2693652

Strand: Reverse

Name: ccpN [H]

Synonym: Dred_2471

Alternate gene names: 134300310

Gene position: 2693652-2693017 (Counterclockwise)

Preceding gene: 134300311

Following gene: 134300309

Centisome position: 74.66

GC content: 43.71

Gene sequence:

>636_bases
ATGGAACTTTCCAAAAGGCAGGAAACCATAATTGAGATTGTCAAAAATGATGGTCCCATCACCGGTGAGCAAATTGCAGA
GCGCCTCAACCTGACAAGGGCAACTTTAAGACCTGATTTATCCATCTTGACAATGGCAGGGTTCCTTGAGGCTCGACCGA
GGGTAGGCTATTATTATAATGGTAAAACTGCAGACAGGATACTGGCGGAGAAAATTACCCGGCTACAAGTAGGTGAGGTT
AAATCTGTGCCAACTGTGGTATCAGAAAGCTGTTCGGTATACGATGCAGTAGTTACCATGTTTATCGAAGATGTGGGTAC
ATTGTATATTGTACGAGAAGGTGGTTTGTTAGAAGGTGTTGTTTCTCGCAAAGATCTACTAAAGACCACCCTTGGTGGTC
AGGATATTCATAAACTGCCTTTGGGTGTCATTATGACACGTATGCCCAATATTCATATGGTGCAGGAGAATGATTCGGTT
TGGTTGGCAGCCCATAAACTTCTAACCCATGAAATCGATTCTCTACCAGTGGTCAGGACTATACAAGGTTCCCGCGGAAA
AGATTACGAAGTCATTGGCAGATTTTCTAAGACAAACGTTACCCGGCTCTTTGTTGAATTTGGCGAAGGGTCTTGA

Upstream 100 bases:

>100_bases
TTTTTCTCAAAAAGTAGGATTTATTTAGTCGAATATAGTATATTATTGTAAGGGAATTCACTATCAATAGTATGTCACAT
TTTAGGTTAGGGGTGAGGGG

Downstream 100 bases:

>100_bases
GGAGGGGTTTACCATTATAGCACCTAAAGACGATCATCCTGTAGTTTATATTGTATCGGATTCCATTGGCGAAACAGCGG
AACTGGTTGCGAAAGCGGCG

Product: signal-transduction protein

Products: NA

Alternate protein names: Catabolite control protein N; Control catabolite protein of gluconeogenesis [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MELSKRQETIIEIVKNDGPITGEQIAERLNLTRATLRPDLSILTMAGFLEARPRVGYYYNGKTADRILAEKITRLQVGEV
KSVPTVVSESCSVYDAVVTMFIEDVGTLYIVREGGLLEGVVSRKDLLKTTLGGQDIHKLPLGVIMTRMPNIHMVQENDSV
WLAAHKLLTHEIDSLPVVRTIQGSRGKDYEVIGRFSKTNVTRLFVEFGEGS

Sequences:

>Translated_211_residues
MELSKRQETIIEIVKNDGPITGEQIAERLNLTRATLRPDLSILTMAGFLEARPRVGYYYNGKTADRILAEKITRLQVGEV
KSVPTVVSESCSVYDAVVTMFIEDVGTLYIVREGGLLEGVVSRKDLLKTTLGGQDIHKLPLGVIMTRMPNIHMVQENDSV
WLAAHKLLTHEIDSLPVVRTIQGSRGKDYEVIGRFSKTNVTRLFVEFGEGS
>Mature_211_residues
MELSKRQETIIEIVKNDGPITGEQIAERLNLTRATLRPDLSILTMAGFLEARPRVGYYYNGKTADRILAEKITRLQVGEV
KSVPTVVSESCSVYDAVVTMFIEDVGTLYIVREGGLLEGVVSRKDLLKTTLGGQDIHKLPLGVIMTRMPNIHMVQENDSV
WLAAHKLLTHEIDSLPVVRTIQGSRGKDYEVIGRFSKTNVTRLFVEFGEGS

Specific function: Transcription repressor that binds to the promoter of gapB and pckA genes, preventing their expression. Acts as a regulator for catabolite repression of gluconeogenic genes [H]

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR016842
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00571 CBS; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 23502; Mature: 23502

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSKRQETIIEIVKNDGPITGEQIAERLNLTRATLRPDLSILTMAGFLEARPRVGYYYN
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEC
GKTADRILAEKITRLQVGEVKSVPTVVSESCSVYDAVVTMFIEDVGTLYIVREGGLLEGV
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
VSRKDLLKTTLGGQDIHKLPLGVIMTRMPNIHMVQENDSVWLAAHKLLTHEIDSLPVVRT
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHCCCCEEEE
IQGSRGKDYEVIGRFSKTNVTRLFVEFGEGS
ECCCCCCCHHHEECCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MELSKRQETIIEIVKNDGPITGEQIAERLNLTRATLRPDLSILTMAGFLEARPRVGYYYN
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEC
GKTADRILAEKITRLQVGEVKSVPTVVSESCSVYDAVVTMFIEDVGTLYIVREGGLLEGV
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHCCCEEEEEECCCHHHHH
VSRKDLLKTTLGGQDIHKLPLGVIMTRMPNIHMVQENDSVWLAAHKLLTHEIDSLPVVRT
HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHCCCCEEEE
IQGSRGKDYEVIGRFSKTNVTRLFVEFGEGS
ECCCCCCCHHHEECCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]