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The map label for this gene is fliD [H]

Identifier: 134300257

GI number: 134300257

Start: 2635175

End: 2637013

Strand: Reverse

Name: fliD [H]

Synonym: Dred_2418

Alternate gene names: 134300257

Gene position: 2637013-2635175 (Counterclockwise)

Preceding gene: 134300258

Following gene: 134300254

Centisome position: 73.09

GC content: 44.26

Gene sequence:

>1839_bases
ATGTCTTCTAACATGAGAATCGGCGGCTTAGCCTCCGGTATGGATATTGACCAGATTGTAAAAGACTTAATGAAAATACA
GAATATGAAAATGGATAAATTAAAGCAAGAAAAGCAGATATTTGAATGGCAGCAAGAGGACTATAGAACCATCAATTCAA
CCCTGCGAAGTTTCCGAGATAATCAGGTTTTTCAAATGAAATTGCAATCCACCTACTTAGCCAGAAACGCTACTTCCTCC
AATGAAAATACCGTAAAGGCAACGGCTAGTTCCTTAGCCCATGAAGGAACCCACCGAATTACCGTTAAGAATCTGGCCGA
AGGGGCTTCCTTAACAAGCAGTGCCAAGATAAGTGCCACAGAAAATTTGGCCACCTTAAATGACCAATTTGGCACCGCAC
ACACAGATCCGCTGGACTTTGTGGTTAACGATGTAATTTTCCAGATGGACCCGCAAACGGAAAGCATTTATGACCTGGTG
GGTAGAATTAATCAGCATTCCTCCGCCGGGGTGTCCCTAAATACCACCCAGCGGGCCACTGCCACAGAAGCCCAGGTACA
AAAACTAAAGCTCGCAGACAGTGCCTTGGCAGAGGGGTTAACCATAACCATTGGAGATAAAAAAGTTGCCCTCTGGGACA
GTACAAATTCTCAATACGAATCGGAAAGCATTGCTAAGTCCGCCCTGAAGGCCGATGTATTATATGATATTGCCAGCCTT
ACCACGGGAGATGCCGTTGTTGACGCTATTAAGAGCGATATAGATGATGGTACATTAGCTATCACTGGAGCAACCTTAAC
CAAAACAGATGTTGGAGAACTAACCATTACATCAAATGAAGTGGGTGCAGAAAAGGCAGTAACAGCAAAGGTAGCCGGGG
GAAAAAGCTGGGATGTCCGGGCCTCCTATGATAGCACAGTGGATCGTTTCTTCCTATTTACCAATAAAACCGGTGAAGAC
CAAAAGCTGGAAGTGGTCAACAATACCCTGGCACAACAACTGAAGCTCACGGATGCCGCGACCCCAACCGTCAATGCGAT
ATCAAATGGCACCAATGCCGATGTAGTGATTGATGGCATGGAAATTACGGAATATAAAAGCAACGAATTCACCCTAAACG
GTGTTACCTATAGGCTACAAAATGCGGATCCCGCTGCAACCACCATTATACAGGTTCAAACAGATAACGATGCGGTATAC
AACTCCATTAAATCCTTTATTGACGAATACAACAAACTTATGGATACCCTTGATACCAAGCTTAACGAAAAACGTTATAA
AGACTATACCTGGCCACTCACAGAGGATCAACAAGAGAAACTGACAGATAACCAAATTGACATGTGGAAGGAAAAGGCCC
GTAGTGGTATGTTGAGAAATGATAATACACTTCGGGATATTCGGGATAAACTAAGAAGCACCATGGGTGAATTGTCTAAA
ATAGGGATCGTGACCACGTCGGACTATTTCTCCAGCAAGCTGGAGATTAAAGAAGATACTTTGAAAAAGGCCATCCAGAA
TGATCTGCAGGGTGTTATGGATGTATTTACCGGTAGTGGTGACGGCGTTGATGGTGTGGGACAAAAACTTTCCGACCATG
TTAGTTCCGGCATTTCCACCATTATCGAGAAAGCCGGTGCCAACGGTAACAAAGCGGATGATGACAGTTTTCTTGGCAAG
CGCATCGATAATGTAAATGATGATATTGACAACTTGGAAGACCGCTTAAAGCAAATTGAAGACCGTTATTGGCGGCAATT
CTCAGCCATGGAAGCGGCCATCAACAAGTTAAACCAACAGAGTTCCTGGCTAATGCAGCAATTCGGAGGAGGGGCATAA

Upstream 100 bases:

>100_bases
GGACAGAACCCTATTGCCCATTATAACCTTATAAATTACTAAAGAAAATGACCAAATCACCGATATATAAATTAGAAGTC
CACGGAAAGGTGGTAGAACC

Downstream 100 bases:

>100_bases
TAACAAACAAACGTAAGAAGATATCTCTTCTTACGTTTGTTTTTTTTCGTCACCTTTAATTAATTGAGCCAAATCTTGAA
TTACCGACTTGGAGGAGACA

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MSSNMRIGGLASGMDIDQIVKDLMKIQNMKMDKLKQEKQIFEWQQEDYRTINSTLRSFRDNQVFQMKLQSTYLARNATSS
NENTVKATASSLAHEGTHRITVKNLAEGASLTSSAKISATENLATLNDQFGTAHTDPLDFVVNDVIFQMDPQTESIYDLV
GRINQHSSAGVSLNTTQRATATEAQVQKLKLADSALAEGLTITIGDKKVALWDSTNSQYESESIAKSALKADVLYDIASL
TTGDAVVDAIKSDIDDGTLAITGATLTKTDVGELTITSNEVGAEKAVTAKVAGGKSWDVRASYDSTVDRFFLFTNKTGED
QKLEVVNNTLAQQLKLTDAATPTVNAISNGTNADVVIDGMEITEYKSNEFTLNGVTYRLQNADPAATTIIQVQTDNDAVY
NSIKSFIDEYNKLMDTLDTKLNEKRYKDYTWPLTEDQQEKLTDNQIDMWKEKARSGMLRNDNTLRDIRDKLRSTMGELSK
IGIVTTSDYFSSKLEIKEDTLKKAIQNDLQGVMDVFTGSGDGVDGVGQKLSDHVSSGISTIIEKAGANGNKADDDSFLGK
RIDNVNDDIDNLEDRLKQIEDRYWRQFSAMEAAINKLNQQSSWLMQQFGGGA

Sequences:

>Translated_612_residues
MSSNMRIGGLASGMDIDQIVKDLMKIQNMKMDKLKQEKQIFEWQQEDYRTINSTLRSFRDNQVFQMKLQSTYLARNATSS
NENTVKATASSLAHEGTHRITVKNLAEGASLTSSAKISATENLATLNDQFGTAHTDPLDFVVNDVIFQMDPQTESIYDLV
GRINQHSSAGVSLNTTQRATATEAQVQKLKLADSALAEGLTITIGDKKVALWDSTNSQYESESIAKSALKADVLYDIASL
TTGDAVVDAIKSDIDDGTLAITGATLTKTDVGELTITSNEVGAEKAVTAKVAGGKSWDVRASYDSTVDRFFLFTNKTGED
QKLEVVNNTLAQQLKLTDAATPTVNAISNGTNADVVIDGMEITEYKSNEFTLNGVTYRLQNADPAATTIIQVQTDNDAVY
NSIKSFIDEYNKLMDTLDTKLNEKRYKDYTWPLTEDQQEKLTDNQIDMWKEKARSGMLRNDNTLRDIRDKLRSTMGELSK
IGIVTTSDYFSSKLEIKEDTLKKAIQNDLQGVMDVFTGSGDGVDGVGQKLSDHVSSGISTIIEKAGANGNKADDDSFLGK
RIDNVNDDIDNLEDRLKQIEDRYWRQFSAMEAAINKLNQQSSWLMQQFGGGA
>Mature_611_residues
SSNMRIGGLASGMDIDQIVKDLMKIQNMKMDKLKQEKQIFEWQQEDYRTINSTLRSFRDNQVFQMKLQSTYLARNATSSN
ENTVKATASSLAHEGTHRITVKNLAEGASLTSSAKISATENLATLNDQFGTAHTDPLDFVVNDVIFQMDPQTESIYDLVG
RINQHSSAGVSLNTTQRATATEAQVQKLKLADSALAEGLTITIGDKKVALWDSTNSQYESESIAKSALKADVLYDIASLT
TGDAVVDAIKSDIDDGTLAITGATLTKTDVGELTITSNEVGAEKAVTAKVAGGKSWDVRASYDSTVDRFFLFTNKTGEDQ
KLEVVNNTLAQQLKLTDAATPTVNAISNGTNADVVIDGMEITEYKSNEFTLNGVTYRLQNADPAATTIIQVQTDNDAVYN
SIKSFIDEYNKLMDTLDTKLNEKRYKDYTWPLTEDQQEKLTDNQIDMWKEKARSGMLRNDNTLRDIRDKLRSTMGELSKI
GIVTTSDYFSSKLEIKEDTLKKAIQNDLQGVMDVFTGSGDGVDGVGQKLSDHVSSGISTIIEKAGANGNKADDDSFLGKR
IDNVNDDIDNLEDRLKQIEDRYWRQFSAMEAAINKLNQQSSWLMQQFGGGA

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=346, Percent_Identity=25.7225433526012, Blast_Score=73, Evalue=7e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 67443; Mature: 67311

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNMRIGGLASGMDIDQIVKDLMKIQNMKMDKLKQEKQIFEWQQEDYRTINSTLRSFRD
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQVFQMKLQSTYLARNATSSNENTVKATASSLAHEGTHRITVKNLAEGASLTSSAKISAT
CCEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCEEECC
ENLATLNDQFGTAHTDPLDFVVNDVIFQMDPQTESIYDLVGRINQHSSAGVSLNTTQRAT
CCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHH
ATEAQVQKLKLADSALAEGLTITIGDKKVALWDSTNSQYESESIAKSALKADVLYDIASL
HHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
TTGDAVVDAIKSDIDDGTLAITGATLTKTDVGELTITSNEVGAEKAVTAKVAGGKSWDVR
CCHHHHHHHHHHCCCCCEEEEECCEEECCCCCCEEEECCCCCCCHHEEEEECCCCCCEEE
ASYDSTVDRFFLFTNKTGEDQKLEVVNNTLAQQLKLTDAATPTVNAISNGTNADVVIDGM
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECC
EITEYKSNEFTLNGVTYRLQNADPAATTIIQVQTDNDAVYNSIKSFIDEYNKLMDTLDTK
EEEEECCCCEEECCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LNEKRYKDYTWPLTEDQQEKLTDNQIDMWKEKARSGMLRNDNTLRDIRDKLRSTMGELSK
HHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IGIVTTSDYFSSKLEIKEDTLKKAIQNDLQGVMDVFTGSGDGVDGVGQKLSDHVSSGIST
CEEEEECHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IIEKAGANGNKADDDSFLGKRIDNVNDDIDNLEDRLKQIEDRYWRQFSAMEAAINKLNQQ
HHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSWLMQQFGGGA
HHHHHHHCCCCC
>Mature Secondary Structure 
SSNMRIGGLASGMDIDQIVKDLMKIQNMKMDKLKQEKQIFEWQQEDYRTINSTLRSFRD
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQVFQMKLQSTYLARNATSSNENTVKATASSLAHEGTHRITVKNLAEGASLTSSAKISAT
CCEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCEEECC
ENLATLNDQFGTAHTDPLDFVVNDVIFQMDPQTESIYDLVGRINQHSSAGVSLNTTQRAT
CCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHH
ATEAQVQKLKLADSALAEGLTITIGDKKVALWDSTNSQYESESIAKSALKADVLYDIASL
HHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
TTGDAVVDAIKSDIDDGTLAITGATLTKTDVGELTITSNEVGAEKAVTAKVAGGKSWDVR
CCHHHHHHHHHHCCCCCEEEEECCEEECCCCCCEEEECCCCCCCHHEEEEECCCCCCEEE
ASYDSTVDRFFLFTNKTGEDQKLEVVNNTLAQQLKLTDAATPTVNAISNGTNADVVIDGM
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECC
EITEYKSNEFTLNGVTYRLQNADPAATTIIQVQTDNDAVYNSIKSFIDEYNKLMDTLDTK
EEEEECCCCEEECCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LNEKRYKDYTWPLTEDQQEKLTDNQIDMWKEKARSGMLRNDNTLRDIRDKLRSTMGELSK
HHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IGIVTTSDYFSSKLEIKEDTLKKAIQNDLQGVMDVFTGSGDGVDGVGQKLSDHVSSGIST
CEEEEECHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IIEKAGANGNKADDDSFLGKRIDNVNDDIDNLEDRLKQIEDRYWRQFSAMEAAINKLNQQ
HHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSWLMQQFGGGA
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]