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The map label for this gene is flgC [H]

Identifier: 134300249

GI number: 134300249

Start: 2630701

End: 2631138

Strand: Reverse

Name: flgC [H]

Synonym: Dred_2410

Alternate gene names: 134300249

Gene position: 2631138-2630701 (Counterclockwise)

Preceding gene: 134300250

Following gene: 134300248

Centisome position: 72.92

GC content: 48.4

Gene sequence:

>438_bases
GTGGGTTTGTTTGATAGTTTTGGTATTAGTGCTTCTGGTATGACTTCTGAGCGACTGAGACTGGATTTAATTTCCAATAA
TATTGCTAATATGAATACCCCCAGTCGACCCAATGACCCCAACAGTCCGGTGTACCGCCGCAGGGTACCGATCTTTGCGG
AACAATTGCGGCAAACGATATCAACCAAAGGGGTTGAACCCAAGGGTGCAGGGGTGCGGGTAAAGGCCATTACAGAAGAT
CCTGCGCCACCCAGAATCGTTAATGATCCAAGTCACCCCTTGGCTGACGATAAAGGTAATGTGGCCTACCCCAATATCAA
CATTGTCAATGAAATGGTGGACATGATCACTGCCAGTCGAACCTACGAGGCCAATGTTACTGCCTTGAATGCAGCCAAGA
GTATGGCCCTGAAGGCCTTAGAAATTTCCCGGGGTTAG

Upstream 100 bases:

>100_bases
ATTTGGCCGCCGCCACCATAGAGTATGATGTGCTGGCCCAGGGAGTCATGGATCGCTTTCATATTTTGGGAACGGTAATC
GGAGGTAGGAGGTAAGAATC

Downstream 100 bases:

>100_bases
GAGGTTTTTAATGAATGAATATTTTGCCTGTGGCCACACCGCTACAAGTTTCTGAGACAACTTCTGCCAATAAATACGCA
GGCCCAGCGGATTTTGGTGG

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MGLFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTISTKGVEPKGAGVRVKAITED
PAPPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITASRTYEANVTALNAAKSMALKALEISRG

Sequences:

>Translated_145_residues
MGLFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTISTKGVEPKGAGVRVKAITED
PAPPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITASRTYEANVTALNAAKSMALKALEISRG
>Mature_144_residues
GLFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTISTKGVEPKGAGVRVKAITEDP
APPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITASRTYEANVTALNAAKSMALKALEISRG

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=144, Percent_Identity=37.5, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15721; Mature: 15590

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTI
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHH
STKGVEPKGAGVRVKAITEDPAPPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITASR
HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCC
TYEANVTALNAAKSMALKALEISRG
CCCCCCEEHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GLFDSFGISASGMTSERLRLDLISNNIANMNTPSRPNDPNSPVYRRRVPIFAEQLRQTI
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHH
STKGVEPKGAGVRVKAITEDPAPPRIVNDPSHPLADDKGNVAYPNINIVNEMVDMITASR
HHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHCCC
TYEANVTALNAAKSMALKALEISRG
CCCCCCEEHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]