| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is flgE [H]
Identifier: 134300239
GI number: 134300239
Start: 2619998
End: 2622568
Strand: Reverse
Name: flgE [H]
Synonym: Dred_2400
Alternate gene names: 134300239
Gene position: 2622568-2619998 (Counterclockwise)
Preceding gene: 134300240
Following gene: 134300238
Centisome position: 72.69
GC content: 45.04
Gene sequence:
>2571_bases ATGCTTCGTTCTCTCTATTCCGGTATTTCAGGCATGAGAAACCACCAGACACGAATGGATGTTACCGGTAATAATATTGC CAACGTAAATACCAACGGTTATAAATCCAGCCGGGTGAATTTTCAGGATACGCTGAGCCAAACAGTTCGTTCCGCGGGCA ATGGTACCAACCCTGCCCAGGTGGGTTCTGGTATGTCTGTGGGGTCTGTGTCCAACAATTTCACCCAGGGACCCATGCAG AGTACAGGCAGAACCCTCGACTTAGGTATACAGGGGAACGGTTTTTTTGTGGTCAGTGATGGCACCAATGAATTCTATAC CAGAGAAGGTATTTTCTTTGTCGATAAACAAGGATTTTTAGTGAATGGCGAAGGGTTAAGGGTACAATCCTTGGCTGGCC AAGACATTAGGGTCCTGAACGGTCCGGTTTCAACCATTAATATCGGGCCCGATGGTGCCATCGCTGGTACCAATACAGCT GGTCAACCACTAAAATTCTCTAATAATGATAGTCAAGCCATTATCACCCCAGCCCAACAGTCTAGCATAAAAGGAGCGCC CAAATACACAACCCCAAAGGTGGAAGAAGCCACCATTAAAGGCATAGCCATGAGTCCGGTAACACAACCCCTGGAGGAAG CAATGGTCAGGGGGGACAGCAATAGTCCGGATGTAGCGCCCCTGGGTATTACAGACAGTGTCACCCCCATTGATATGAGC ACTGATCAACTTACATTGAAATATTCCGATGGGACCAATACTTATACAGCCACATTAAATACTGGCTTGACCCAAGTGAA AAGTTGGTATGATTTGGCCTCACAATTGCAAAATGCGATAAACACTTACGAAAATCCCCCAGGATCAGGTACTTTCCCTT TAAAGGATAAAGTTATAGTATCCTACGACGGTAGCCCCAATGGGGGACTGGTATTCCAAACCAAAACAAGCAACGTTACA CCTGGTGTAATACCTAGTATTGAAATAGGAGGCGCTGGTGTTAAGAGGTACATGGGTGGCGTGGCCACTTCGGCCTTATC TGACACAGGTAAAGAAGTAGTAACGAAGGACTGGACAGGAAAAACCTTTTATATTGATACCGGTAACGGTTGGGAGCAAG TAACAACGGTGGATGACTTCTCGAAGATTGGTGGAGCTGCCGGGTCCACCGGGTTAGATGCAGTTACAAGTGGTGAAGAT TTGGCCCAAAAACTGCAAGCATTATTGGATGCACGGACTACAATACCTGGGACTAATATCACAGTTCCTGAAAATATGAC AGCAACTAATGCTACAGCTGGAAATGTTACAATCACTGGTAAGTATTCAGATACCTCTGATGGAACGGTATCAGTAGTGT ATAGTGAAGGCAGTGCAACTACTACACCAGATCCGGCCAACAGTTTAGCAGGAAGCCCCACTGTGAATGCTTCAAAATAT TATAATACACCAGCAACATGGAATTTAAAGTATGATAATGCTACTTCAGATTGGTTGCTTGATAAGGGTGACGGTACAGG CTATAATTCTATTACTTTTACCGGTGATATTTATACCGATCCTAGCGGTGTCGAAATTGACAAAACAGGTCTTACACCCA CATCTGACAATAATTGGGACATCTCATTGACAAGCGGATCAATTAGTATTAGCGGGGTTTCTGGGGCTGTAACTCTGTCT AATGGTGATACATCAGCAACTTATAACGGGTTAACGATAGATGTATCTGACGTAATTAGTACAGGAACGGTACAAAACGG AGATACCTGGACCTATAATGTAAAGGCCGACAAACCATCTACCAATGTAGCAGTGACCTGGAATATCGACCACTTGGAAT TCTCTACGGTTGGTACACCAAAGGATGGGTCCACCATACCTCAAATTCGAATTAAGGACGCAGTGGACTTGATCGGTTAT GTCGACAGAACTGAAAAAGGGGTCAATTCCGCCGACTGGTCCGAGAAAGACTTTTTTATTGAATATAATGGTGCAAAATA TACCTTCACCGCAGGGGAGAAAAAAGAAGCAGGATTTGGTAATATTATCAGTGGAGAATCCTTAAAAATAGCTTTAGAAA AGTTAATCGACAAAAAAATTGGCGAAAATAAGATCAAAGTGGATTATATGAACGACGGCAAGCTGGTACTTCAGACCATT GATAACGGCGAAATTGGGGAAACGCCCAGCGTTAATATTGGTGGCTCCCATGCTGCAGATCTCATCGGTGACAAGCCGGA TAAAGTGGATGGTGAAGCTGCCAGTGTTACACCTCCGCCCCAGGATACCATGGGTGTCATTAAGCTGGTTACGTTCCAAA ACCCGGAGGGTCTGGAGAAGGCAGGAAGAAACCTTTTTGGCACCTCGGTATCATCGGGCGAACCTAAACAAGGGCAGGCT AATCAATCTGGTTTTGGAACCATTAACTCAGGCTACCTGGAAATGTCCAACGTTGATCTGACCGAAGAATTTACCAACAT GATTACCACTCAGCGGGGCTACCAGGCCAATGCCAGGGTCATTACCGTATCTGACAGCCTACTGGAGGAACTAATTCAAC TCAAACGGTAG
Upstream 100 bases:
>100_bases ATTGATAGTGCTGTCATTGTAAAATAATAAGCAGCTGGCCCGAAAGGAAGCTGCCTGAATCCACCGACCGACTGAGGTGG ATATATAAGGAGGTAAAAGG
Downstream 100 bases:
>100_bases TAAATCAGTTAGAATAGAATTATAGTGTAAAGGGTGAGTTATCAGTGCCACCACAGGAAACAGCACCTCAGGTGCCTAAA AAAAGTTTTATTTCCATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MLRSLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQVGSGMSVGSVSNNFTQGPMQ STGRTLDLGIQGNGFFVVSDGTNEFYTREGIFFVDKQGFLVNGEGLRVQSLAGQDIRVLNGPVSTINIGPDGAIAGTNTA GQPLKFSNNDSQAIITPAQQSSIKGAPKYTTPKVEEATIKGIAMSPVTQPLEEAMVRGDSNSPDVAPLGITDSVTPIDMS TDQLTLKYSDGTNTYTATLNTGLTQVKSWYDLASQLQNAINTYENPPGSGTFPLKDKVIVSYDGSPNGGLVFQTKTSNVT PGVIPSIEIGGAGVKRYMGGVATSALSDTGKEVVTKDWTGKTFYIDTGNGWEQVTTVDDFSKIGGAAGSTGLDAVTSGED LAQKLQALLDARTTIPGTNITVPENMTATNATAGNVTITGKYSDTSDGTVSVVYSEGSATTTPDPANSLAGSPTVNASKY YNTPATWNLKYDNATSDWLLDKGDGTGYNSITFTGDIYTDPSGVEIDKTGLTPTSDNNWDISLTSGSISISGVSGAVTLS NGDTSATYNGLTIDVSDVISTGTVQNGDTWTYNVKADKPSTNVAVTWNIDHLEFSTVGTPKDGSTIPQIRIKDAVDLIGY VDRTEKGVNSADWSEKDFFIEYNGAKYTFTAGEKKEAGFGNIISGESLKIALEKLIDKKIGENKIKVDYMNDGKLVLQTI DNGEIGETPSVNIGGSHAADLIGDKPDKVDGEAASVTPPPQDTMGVIKLVTFQNPEGLEKAGRNLFGTSVSSGEPKQGQA NQSGFGTINSGYLEMSNVDLTEEFTNMITTQRGYQANARVITVSDSLLEELIQLKR
Sequences:
>Translated_856_residues MLRSLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQVGSGMSVGSVSNNFTQGPMQ STGRTLDLGIQGNGFFVVSDGTNEFYTREGIFFVDKQGFLVNGEGLRVQSLAGQDIRVLNGPVSTINIGPDGAIAGTNTA GQPLKFSNNDSQAIITPAQQSSIKGAPKYTTPKVEEATIKGIAMSPVTQPLEEAMVRGDSNSPDVAPLGITDSVTPIDMS TDQLTLKYSDGTNTYTATLNTGLTQVKSWYDLASQLQNAINTYENPPGSGTFPLKDKVIVSYDGSPNGGLVFQTKTSNVT PGVIPSIEIGGAGVKRYMGGVATSALSDTGKEVVTKDWTGKTFYIDTGNGWEQVTTVDDFSKIGGAAGSTGLDAVTSGED LAQKLQALLDARTTIPGTNITVPENMTATNATAGNVTITGKYSDTSDGTVSVVYSEGSATTTPDPANSLAGSPTVNASKY YNTPATWNLKYDNATSDWLLDKGDGTGYNSITFTGDIYTDPSGVEIDKTGLTPTSDNNWDISLTSGSISISGVSGAVTLS NGDTSATYNGLTIDVSDVISTGTVQNGDTWTYNVKADKPSTNVAVTWNIDHLEFSTVGTPKDGSTIPQIRIKDAVDLIGY VDRTEKGVNSADWSEKDFFIEYNGAKYTFTAGEKKEAGFGNIISGESLKIALEKLIDKKIGENKIKVDYMNDGKLVLQTI DNGEIGETPSVNIGGSHAADLIGDKPDKVDGEAASVTPPPQDTMGVIKLVTFQNPEGLEKAGRNLFGTSVSSGEPKQGQA NQSGFGTINSGYLEMSNVDLTEEFTNMITTQRGYQANARVITVSDSLLEELIQLKR >Mature_856_residues MLRSLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQVGSGMSVGSVSNNFTQGPMQ STGRTLDLGIQGNGFFVVSDGTNEFYTREGIFFVDKQGFLVNGEGLRVQSLAGQDIRVLNGPVSTINIGPDGAIAGTNTA GQPLKFSNNDSQAIITPAQQSSIKGAPKYTTPKVEEATIKGIAMSPVTQPLEEAMVRGDSNSPDVAPLGITDSVTPIDMS TDQLTLKYSDGTNTYTATLNTGLTQVKSWYDLASQLQNAINTYENPPGSGTFPLKDKVIVSYDGSPNGGLVFQTKTSNVT PGVIPSIEIGGAGVKRYMGGVATSALSDTGKEVVTKDWTGKTFYIDTGNGWEQVTTVDDFSKIGGAAGSTGLDAVTSGED LAQKLQALLDARTTIPGTNITVPENMTATNATAGNVTITGKYSDTSDGTVSVVYSEGSATTTPDPANSLAGSPTVNASKY YNTPATWNLKYDNATSDWLLDKGDGTGYNSITFTGDIYTDPSGVEIDKTGLTPTSDNNWDISLTSGSISISGVSGAVTLS NGDTSATYNGLTIDVSDVISTGTVQNGDTWTYNVKADKPSTNVAVTWNIDHLEFSTVGTPKDGSTIPQIRIKDAVDLIGY VDRTEKGVNSADWSEKDFFIEYNGAKYTFTAGEKKEAGFGNIISGESLKIALEKLIDKKIGENKIKVDYMNDGKLVLQTI DNGEIGETPSVNIGGSHAADLIGDKPDKVDGEAASVTPPPQDTMGVIKLVTFQNPEGLEKAGRNLFGTSVSSGEPKQGQA NQSGFGTINSGYLEMSNVDLTEEFTNMITTQRGYQANARVITVSDSLLEELIQLKR
Specific function: Unknown
COG id: COG1749
COG function: function code N; Flagellar hook protein FlgE
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=166, Percent_Identity=37.3493975903614, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1787316, Length=92, Percent_Identity=44.5652173913043, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR011491 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF07559 FlaE; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 90312; Mature: 90312
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQ CHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH VGSGMSVGSVSNNFTQGPMQSTGRTLDLGIQGNGFFVVSDGTNEFYTREGIFFVDKQGFL HCCCCEECCCCCCCCCCCHHHCCCEEEEEEECCCEEEEECCCCCEEEECCEEEEECCCEE VNGEGLRVQSLAGQDIRVLNGPVSTINIGPDGAIAGTNTAGQPLKFSNNDSQAIITPAQQ ECCCCEEEEECCCCCEEEECCCCEEEEECCCCCEECCCCCCCCEEECCCCCEEEEECCHH SSIKGAPKYTTPKVEEATIKGIAMSPVTQPLEEAMVRGDSNSPDVAPLGITDSVTPIDMS CCCCCCCCCCCCCCCHHEECCEEECCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEECC TDQLTLKYSDGTNTYTATLNTGLTQVKSWYDLASQLQNAINTYENPPGSGTFPLKDKVIV CCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE SYDGSPNGGLVFQTKTSNVTPGVIPSIEIGGAGVKRYMGGVATSALSDTGKEVVTKDWTG EECCCCCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHEECCCCC KTFYIDTGNGWEQVTTVDDFSKIGGAAGSTGLDAVTSGEDLAQKLQALLDARTTIPGTNI CEEEEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE TVPENMTATNATAGNVTITGKYSDTSDGTVSVVYSEGSATTTPDPANSLAGSPTVNASKY ECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCEE YNTPATWNLKYDNATSDWLLDKGDGTGYNSITFTGDIYTDPSGVEIDKTGLTPTSDNNWD ECCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCCEE ISLTSGSISISGVSGAVTLSNGDTSATYNGLTIDVSDVISTGTVQNGDTWTYNVKADKPS EEEECCEEEEECCCEEEEECCCCCCEEECCEEEEHHHHHCCCCCCCCCEEEEEEECCCCC TNVAVTWNIDHLEFSTVGTPKDGSTIPQIRIKDAVDLIGYVDRTEKGVNSADWSEKDFFI CCEEEEEEECCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEE EYNGAKYTFTAGEKKEAGFGNIISGESLKIALEKLIDKKIGENKIKVDYMNDGKLVLQTI EECCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEE DNGEIGETPSVNIGGSHAADLIGDKPDKVDGEAASVTPPPQDTMGVIKLVTFQNPEGLEK CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHH AGRNLFGTSVSSGEPKQGQANQSGFGTINSGYLEMSNVDLTEEFTNMITTQRGYQANARV HCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCEE ITVSDSLLEELIQLKR EEECHHHHHHHHHHCC >Mature Secondary Structure MLRSLYSGISGMRNHQTRMDVTGNNIANVNTNGYKSSRVNFQDTLSQTVRSAGNGTNPAQ CHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHH VGSGMSVGSVSNNFTQGPMQSTGRTLDLGIQGNGFFVVSDGTNEFYTREGIFFVDKQGFL HCCCCEECCCCCCCCCCCHHHCCCEEEEEEECCCEEEEECCCCCEEEECCEEEEECCCEE VNGEGLRVQSLAGQDIRVLNGPVSTINIGPDGAIAGTNTAGQPLKFSNNDSQAIITPAQQ ECCCCEEEEECCCCCEEEECCCCEEEEECCCCCEECCCCCCCCEEECCCCCEEEEECCHH SSIKGAPKYTTPKVEEATIKGIAMSPVTQPLEEAMVRGDSNSPDVAPLGITDSVTPIDMS CCCCCCCCCCCCCCCHHEECCEEECCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCEECC TDQLTLKYSDGTNTYTATLNTGLTQVKSWYDLASQLQNAINTYENPPGSGTFPLKDKVIV CCEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE SYDGSPNGGLVFQTKTSNVTPGVIPSIEIGGAGVKRYMGGVATSALSDTGKEVVTKDWTG EECCCCCCCEEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHEECCCCC KTFYIDTGNGWEQVTTVDDFSKIGGAAGSTGLDAVTSGEDLAQKLQALLDARTTIPGTNI CEEEEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEE TVPENMTATNATAGNVTITGKYSDTSDGTVSVVYSEGSATTTPDPANSLAGSPTVNASKY ECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCEE YNTPATWNLKYDNATSDWLLDKGDGTGYNSITFTGDIYTDPSGVEIDKTGLTPTSDNNWD ECCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCCEE ISLTSGSISISGVSGAVTLSNGDTSATYNGLTIDVSDVISTGTVQNGDTWTYNVKADKPS EEEECCEEEEECCCEEEEECCCCCCEEECCEEEEHHHHHCCCCCCCCCEEEEEEECCCCC TNVAVTWNIDHLEFSTVGTPKDGSTIPQIRIKDAVDLIGYVDRTEKGVNSADWSEKDFFI CCEEEEEEECCEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEE EYNGAKYTFTAGEKKEAGFGNIISGESLKIALEKLIDKKIGENKIKVDYMNDGKLVLQTI EECCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEE DNGEIGETPSVNIGGSHAADLIGDKPDKVDGEAASVTPPPQDTMGVIKLVTFQNPEGLEK CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHH AGRNLFGTSVSSGEPKQGQANQSGFGTINSGYLEMSNVDLTEEFTNMITTQRGYQANARV HCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCEE ITVSDSLLEELIQLKR EEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]