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The map label for this gene is fliP [H]

Identifier: 134300235

GI number: 134300235

Start: 2617902

End: 2618675

Strand: Reverse

Name: fliP [H]

Synonym: Dred_2396

Alternate gene names: 134300235

Gene position: 2618675-2617902 (Counterclockwise)

Preceding gene: 134300236

Following gene: 134300234

Centisome position: 72.58

GC content: 41.99

Gene sequence:

>774_bases
GTGGTCAGAAAGAAAAAGATTAACGCATGGATCATCATAGTATTGACAGCATTGTTACTTTTCCTGATTCCCAATGGGGT
TTTTGCGGAACCCCTTATTCCTATACCCAGTATTAACTTAAATGTAGAGACTGCCCAGGAGCCTCAGCAGGTGGTAGACA
GCGTAAAACTGCTGATTTTTTTAACCCTACTGTCCATGGTCCCTGCATTTTTAATGATGTTAACTTCCTTTACGCGGATT
ATTGTGGTACTTTCTTTTTTGCGCAGTGCCCTGGGTACACAGCAGACGCCTCCGAATCAAGTGTTAATTGGCTTGGCCCT
TTTCCTGACGATTTTTATTATGAATCCGGTGTATCAGGATATAAATAAGAATTCCATACAGCCTTATTTAGCCAACCAAT
TAACCTATGAGCAAGCAACGGATCAAGCTGCTAAACCCCTAAGGAATTTTATGGTAAGGCAAACCCGCGAGAAAGACCTA
GGGTTGTTTTTAAACATTGCCAAAATGGACAAACCCAAAAATGCAAATGAAGTGCCGATGAGTGTATTGGTACCAGCCTT
TGTCATCAGTGAGTTGAAAACAGCCTTTCAAATCGGCTTTATCCTGTTTGTCCCATTTCTAGTCATCGATATGGTGGTTG
CCAGTACCTTAATGTCCATGGGGATGTTTATGCTACCGCCGGTGATGGTTGCACTGCCCTTTAAATTGCTTCTCTTTGTC
ATGGTGGATGGTTGGTATTTGGTGGTAAAATCTTTGGTGGAAAGTTTTCGATAG

Upstream 100 bases:

>100_bases
ACCAATTTCAAAGATATTTTGTATCAGCACATGAAACAAACACAGCAGTACCTATCCGGCAAGGGCCGTAAAGGAAAAAG
TGGGAGTGGGTGTCCGGCAA

Downstream 100 bases:

>100_bases
GGGGGGCTAAGCCATGACACAAACCTATGTACTGCACTTGGCCCGGGAAGCGTTAATGATGGTTGTGATTCTTTCCATTC
CAACCCTGGGAGTGGCCATG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MVRKKKINAWIIIVLTALLLFLIPNGVFAEPLIPIPSINLNVETAQEPQQVVDSVKLLIFLTLLSMVPAFLMMLTSFTRI
IVVLSFLRSALGTQQTPPNQVLIGLALFLTIFIMNPVYQDINKNSIQPYLANQLTYEQATDQAAKPLRNFMVRQTREKDL
GLFLNIAKMDKPKNANEVPMSVLVPAFVISELKTAFQIGFILFVPFLVIDMVVASTLMSMGMFMLPPVMVALPFKLLLFV
MVDGWYLVVKSLVESFR

Sequences:

>Translated_257_residues
MVRKKKINAWIIIVLTALLLFLIPNGVFAEPLIPIPSINLNVETAQEPQQVVDSVKLLIFLTLLSMVPAFLMMLTSFTRI
IVVLSFLRSALGTQQTPPNQVLIGLALFLTIFIMNPVYQDINKNSIQPYLANQLTYEQATDQAAKPLRNFMVRQTREKDL
GLFLNIAKMDKPKNANEVPMSVLVPAFVISELKTAFQIGFILFVPFLVIDMVVASTLMSMGMFMLPPVMVALPFKLLLFV
MVDGWYLVVKSLVESFR
>Mature_257_residues
MVRKKKINAWIIIVLTALLLFLIPNGVFAEPLIPIPSINLNVETAQEPQQVVDSVKLLIFLTLLSMVPAFLMMLTSFTRI
IVVLSFLRSALGTQQTPPNQVLIGLALFLTIFIMNPVYQDINKNSIQPYLANQLTYEQATDQAAKPLRNFMVRQTREKDL
GLFLNIAKMDKPKNANEVPMSVLVPAFVISELKTAFQIGFILFVPFLVIDMVVASTLMSMGMFMLPPVMVALPFKLLLFV
MVDGWYLVVKSLVESFR

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=202, Percent_Identity=56.9306930693069, Blast_Score=242, Evalue=1e-65,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28923; Mature: 28923

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]