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The map label for this gene is ypjG [H]

Identifier: 134300163

GI number: 134300163

Start: 2542467

End: 2543195

Strand: Reverse

Name: ypjG [H]

Synonym: Dred_2324

Alternate gene names: 134300163

Gene position: 2543195-2542467 (Counterclockwise)

Preceding gene: 134300164

Following gene: 134300162

Centisome position: 70.49

GC content: 47.46

Gene sequence:

>729_bases
TTGATTACCGTTAACAAGATCGATGTATTGGCAATTGGGGCCCATCCGGATGATATTGAAGCAGGGGCCGGGGGTCTTGT
GGCAAAATTTGTTCAGCAGGGGCTCAGCGTGGGGCTGCTTGATCTTACAGCCGGGGAAATGTCTACTAACGGAACTCCTG
AAGAGCGTCAGAAAGAGGCCCAAGGTGCTGCTCAGGTGCTAGGAGTAACCTGGCGCAAATGTCTGGGATTACCGGATCGA
GAAATTACTCTGATTAAAAAAAACGTAAAGGCTCTGGTAGAAGTGATTCGTCAGAGCAGGCCCCGTTTAATCCTTTGCCC
TTATTGGGAAGACCGGCACCCAGATCATGTCAATGCTGCCAGACTTACGATAGAAGCCCATTTTGATGCGGGGCTAAAAA
AGGTTTGTGATCATTTACTTCCCCATCGTGCCAGCCATCTTTGGCATTATTTTTTGTCCAGAGCAACTGAACCTCAATTT
GTCGTGGATGTTAGTCATTGCTATGAGATAAAAAGGGCGGCCATTATGGCACACAAAACACAATTTGGCCAGGGACGGGA
TATCCAAAAAACATTTCTGAACGCTGGTCCCGGTAGTTTTCTTTCCATAATAGAAAGTCGGGATTGCTATTATGGGTCCT
TGATGGGATGTCAATATGGTGAAGGGTTTATTACGGCAATTCCTCTGGCCATTCAAGATCCGACCAGCTTGCTGGGGGTG
AAGGGATGA

Upstream 100 bases:

>100_bases
GTGTTTTGCTAGTATTGTAAACTGTGCTACGATAATGTGCATACCTTGCTTATATAGTGCAAGGATTTTTTTTCAACTGG
CGAACTAATAAAAAAAGGAG

Downstream 100 bases:

>100_bases
AGGTTGGTATGTTGTGCCATGCTAGCTATGGAGGTAGTGGTGTGGTGGCGGCAGAGTTAGGGAAATGTTTGGCAAAGCGG
GGGCATGAGGTTCATTTTAT

Product: LmbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MITVNKIDVLAIGAHPDDIEAGAGGLVAKFVQQGLSVGLLDLTAGEMSTNGTPEERQKEAQGAAQVLGVTWRKCLGLPDR
EITLIKKNVKALVEVIRQSRPRLILCPYWEDRHPDHVNAARLTIEAHFDAGLKKVCDHLLPHRASHLWHYFLSRATEPQF
VVDVSHCYEIKRAAIMAHKTQFGQGRDIQKTFLNAGPGSFLSIIESRDCYYGSLMGCQYGEGFITAIPLAIQDPTSLLGV
KG

Sequences:

>Translated_242_residues
MITVNKIDVLAIGAHPDDIEAGAGGLVAKFVQQGLSVGLLDLTAGEMSTNGTPEERQKEAQGAAQVLGVTWRKCLGLPDR
EITLIKKNVKALVEVIRQSRPRLILCPYWEDRHPDHVNAARLTIEAHFDAGLKKVCDHLLPHRASHLWHYFLSRATEPQF
VVDVSHCYEIKRAAIMAHKTQFGQGRDIQKTFLNAGPGSFLSIIESRDCYYGSLMGCQYGEGFITAIPLAIQDPTSLLGV
KG
>Mature_242_residues
MITVNKIDVLAIGAHPDDIEAGAGGLVAKFVQQGLSVGLLDLTAGEMSTNGTPEERQKEAQGAAQVLGVTWRKCLGLPDR
EITLIKKNVKALVEVIRQSRPRLILCPYWEDRHPDHVNAARLTIEAHFDAGLKKVCDHLLPHRASHLWHYFLSRATEPQF
VVDVSHCYEIKRAAIMAHKTQFGQGRDIQKTFLNAGPGSFLSIIESRDCYYGSLMGCQYGEGFITAIPLAIQDPTSLLGV
KG

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

Organism=Escherichia coli, GI87081726, Length=179, Percent_Identity=27.9329608938547, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 26625; Mature: 26625

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVNKIDVLAIGAHPDDIEAGAGGLVAKFVQQGLSVGLLDLTAGEMSTNGTPEERQKEA
CEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHH
QGAAQVLGVTWRKCLGLPDREITLIKKNVKALVEVIRQSRPRLILCPYWEDRHPDHVNAA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEE
RLTIEAHFDAGLKKVCDHLLPHRASHLWHYFLSRATEPQFVVDVSHCYEIKRAAIMAHKT
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
QFGQGRDIQKTFLNAGPGSFLSIIESRDCYYGSLMGCQYGEGFITAIPLAIQDPTSLLGV
CCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHCCC
KG
CC
>Mature Secondary Structure
MITVNKIDVLAIGAHPDDIEAGAGGLVAKFVQQGLSVGLLDLTAGEMSTNGTPEERQKEA
CEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHH
QGAAQVLGVTWRKCLGLPDREITLIKKNVKALVEVIRQSRPRLILCPYWEDRHPDHVNAA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEE
RLTIEAHFDAGLKKVCDHLLPHRASHLWHYFLSRATEPQFVVDVSHCYEIKRAAIMAHKT
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH
QFGQGRDIQKTFLNAGPGSFLSIIESRDCYYGSLMGCQYGEGFITAIPLAIQDPTSLLGV
CCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHCCC
KG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]