| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134300149
Identifier: 134300149
GI number: 134300149
Start: 2527398
End: 2528321
Strand: Reverse
Name: 134300149
Synonym: Dred_2310
Alternate gene names: NA
Gene position: 2528321-2527398 (Counterclockwise)
Preceding gene: 134300150
Following gene: 134300148
Centisome position: 70.07
GC content: 47.29
Gene sequence:
>924_bases ATGATTCGTGTTGTCCAAGGGGACTTAAAGGTACTTAGCCAGTTTTATTCTAAACAAGATCAAGTAATGCAAGCGGATAG AAAAGAGAACCTTCAGCAAGAAATACGGAAAATTACGGCTAAAGCCCTAAGGGTTGCAGAAGAACAGCGCTTAAAGGCAC TGATATTACCAGTGGTAAATACCAGAGGACAAGAGATTTCGGTGGAGGAGATGGCCCGGATCATGGTTTCTGAAGCCAGA AGGCATATGTCCCTAGGTGCTGGTTTAAATGAACTGACCTTTGCATTGACGGATCCCGAAGGGGTGCAAGCCTTTGAAGA GGTGATATACCGGAATAAGATCCTTTGTTTAGGTGACAGTATCACCTATGGCTATCCCGATGGCCCGGCATTCTCCTGGG TGACCAGGGTGATTGAAAGTACCGGGTATCAAATGTTGAACCGTGGTATCAATGGAGAAACTACTGGACAGATGCTGGTA CGGATGCGGACTGATGTGATCCCAGAAAAACCTGCCTATTTAATCTTTGCCGGGGGACACAATGATGGCTGGCAGAAGGT TTCCCTGGGGGAGGTTAAGCAGAATGTCCGGCAGGTGGTAGGAATGGCTTTAGAGCATGGAATTTGCCCCGTTATGGTCT TACCTTCTCCTTTAAATATTGAACAAATTCTGCAATGCTATGAAGGTAGCCGCCAGGAAGCCGAGGATTATAACAACGCA TTAAGTGAGACTCGCCAGTGGATCGGCCAATATGCCCAGGAGATGGGGTTCTTTGCATTAGACTTTTATACACCACTGTT GGTAGAAGGCTCCGACCAGGGAAATCCTCAGTACTTGCTGGACGGTGGACACCCCACCCACGAAGGATACCGGGTACTGG GAGATGCTGCCATTAAACAATTAGCAGGCAGGTTGTACTTATAA
Upstream 100 bases:
>100_bases GTTGACTTAGCAGAGATGTTTTTCAAAAAACCAAAAGGTTTCCATTTTTAGACAGAGAATACTTCTATAATAATAACTGG TAAATCTGGGAGGGAAGAGG
Downstream 100 bases:
>100_bases TAACGATACGCTGGTTCGTTTTGCAATGGGAAGGGAACGATAAGCAAGGGGATTTAAGTTTATCCCTGTGCAGCGACTTA TCTAAGCAATGGTAACAGGA
Product: GDSL family lipase
Products: NA
Alternate protein names: Arylesterase; GDSL Family Lipase; Lipolytic G-D-S-L; Phosphatase; Lipolytic Protein; GDSL Family Lipase/Acylhydrolase; TesA-Like Protease; Esterase; Lysophospholipase; GDSL-Like Lipase/Acylhydrolase; Lipase/Acylhydrolase GDSL Family; Acylhydrolase; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MIRVVQGDLKVLSQFYSKQDQVMQADRKENLQQEIRKITAKALRVAEEQRLKALILPVVNTRGQEISVEEMARIMVSEAR RHMSLGAGLNELTFALTDPEGVQAFEEVIYRNKILCLGDSITYGYPDGPAFSWVTRVIESTGYQMLNRGINGETTGQMLV RMRTDVIPEKPAYLIFAGGHNDGWQKVSLGEVKQNVRQVVGMALEHGICPVMVLPSPLNIEQILQCYEGSRQEAEDYNNA LSETRQWIGQYAQEMGFFALDFYTPLLVEGSDQGNPQYLLDGGHPTHEGYRVLGDAAIKQLAGRLYL
Sequences:
>Translated_307_residues MIRVVQGDLKVLSQFYSKQDQVMQADRKENLQQEIRKITAKALRVAEEQRLKALILPVVNTRGQEISVEEMARIMVSEAR RHMSLGAGLNELTFALTDPEGVQAFEEVIYRNKILCLGDSITYGYPDGPAFSWVTRVIESTGYQMLNRGINGETTGQMLV RMRTDVIPEKPAYLIFAGGHNDGWQKVSLGEVKQNVRQVVGMALEHGICPVMVLPSPLNIEQILQCYEGSRQEAEDYNNA LSETRQWIGQYAQEMGFFALDFYTPLLVEGSDQGNPQYLLDGGHPTHEGYRVLGDAAIKQLAGRLYL >Mature_307_residues MIRVVQGDLKVLSQFYSKQDQVMQADRKENLQQEIRKITAKALRVAEEQRLKALILPVVNTRGQEISVEEMARIMVSEAR RHMSLGAGLNELTFALTDPEGVQAFEEVIYRNKILCLGDSITYGYPDGPAFSWVTRVIESTGYQMLNRGINGETTGQMLV RMRTDVIPEKPAYLIFAGGHNDGWQKVSLGEVKQNVRQVVGMALEHGICPVMVLPSPLNIEQILQCYEGSRQEAEDYNNA LSETRQWIGQYAQEMGFFALDFYTPLLVEGSDQGNPQYLLDGGHPTHEGYRVLGDAAIKQLAGRLYL
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34486; Mature: 34486
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVVQGDLKVLSQFYSKQDQVMQADRKENLQQEIRKITAKALRVAEEQRLKALILPVVN CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TRGQEISVEEMARIMVSEARRHMSLGAGLNELTFALTDPEGVQAFEEVIYRNKILCLGDS CCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHCCEEEEECC ITYGYPDGPAFSWVTRVIESTGYQMLNRGINGETTGQMLVRMRTDVIPEKPAYLIFAGGH EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC NDGWQKVSLGEVKQNVRQVVGMALEHGICPVMVLPSPLNIEQILQCYEGSRQEAEDYNNA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHH LSETRQWIGQYAQEMGFFALDFYTPLLVEGSDQGNPQYLLDGGHPTHEGYRVLGDAAIKQ HHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHH LAGRLYL HHHHCCC >Mature Secondary Structure MIRVVQGDLKVLSQFYSKQDQVMQADRKENLQQEIRKITAKALRVAEEQRLKALILPVVN CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TRGQEISVEEMARIMVSEARRHMSLGAGLNELTFALTDPEGVQAFEEVIYRNKILCLGDS CCCCEECHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHCCEEEEECC ITYGYPDGPAFSWVTRVIESTGYQMLNRGINGETTGQMLVRMRTDVIPEKPAYLIFAGGH EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC NDGWQKVSLGEVKQNVRQVVGMALEHGICPVMVLPSPLNIEQILQCYEGSRQEAEDYNNA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHH LSETRQWIGQYAQEMGFFALDFYTPLLVEGSDQGNPQYLLDGGHPTHEGYRVLGDAAIKQ HHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHH LAGRLYL HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA