| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is pbuG [H]
Identifier: 134300141
GI number: 134300141
Start: 2516472
End: 2517767
Strand: Reverse
Name: pbuG [H]
Synonym: Dred_2302
Alternate gene names: 134300141
Gene position: 2517767-2516472 (Counterclockwise)
Preceding gene: 134300142
Following gene: 134300139
Centisome position: 69.78
GC content: 41.9
Gene sequence:
>1296_bases ATGAGAAAATATTTTGGCTTTGATGAGTATGGTATATCCTACAGAACGGAATTTATTGGTGGAATGACAACTTTCTTATC CATGTGTTATATTTTAGTGGCTAATCCGATGATCCTTGGGGAGGCAGGAATGGATAAGGGTGCGGTATTTACAGCAACGG CCCTTTCCGCCATCATAGGAACCCTGGTTATGGGTGTGCTGGCCAATTACCCCTTGGCACTGGCACCAAGTCTTGGCCTA AATTCATTTTTTACCTACTCAGTGGTTATAGGTATGGGCGTAGCCTGGGAAACTGCCCTGGCTGGGGTGCTGGTTTCAGG GCTTGTATTCATGGCTATTACTGCCTTTAAAATTCGGGAAAAGATTATTGATGCGATTCCTGAGGAGTTAAAGTATGCCA TTGCTGGAGGAATTGGTTTTTTTATTGCCTTTATAGGTTTAAAAAATGCAGGAATAATAGTAAGCCATAAGGCAACCTAC GTTTCCCTGGGGAATTTACAAGAACCTTCAACACTTCTTGCCCTTTTTGGTTTTATCATTACCGTGGTGTTTATTGTTAA GGGTTGGCAGGGAGGCATTTTCTATGGTATGGTTGTTACCACCATTGTTGGTATGGTAGCGGGAATTATTGATAAACCAG TTGCTATCATAGGTGGCATTCCCAGCTTAGAACCTACCTTTGGGGTTGCCTTTAGTCATATACCGGATGTTTTTAATTAT GATATGCTATTAGTGATTTTTACATTTTTATTTGTCAGCTTCTTTGATGCTTCCGGAACCTTGATTGCCGTGGCTAATCA GGCGGGTATTATGAAAAACAATAAGATTCCAAGGGTTAGTCAAGCCCTTATGGCAGATGCCTCTGCGTCAGTTGTTGGAG CAACCTTTGGTACATCCACTGTAACGGCATTAATTGAATCCTCTGCTGGGATTGCAGTGGGGGCCAGAACCGGGTTTTCT TCCATTGTAGTAGCAGCGTTTTTCTTTTTAGCACTGTTTTTCTCGCCGTTATTATCAGTTATCACAACTCCGGTTACGGC GCCGGCCCTCATCATTGTAGGTTCCATGATGGCCAGTCAAATTAATAAGATTAAATGGCAGCAATTCGATGTGGCACTGC CGGCCTTTATTACCATCATTATGATGCCCTTAACCTTCAGTGTGGCAACAGGCATTGCCTTAGGTTTTATTATGTACCCC ATCATTAAACTGGCCATGAGAAAGTACCAGGAAATTCACCCCATCATGTATGGGTTAATGTTTATCTTTATGTTGTACTT TTACTATATTAATTAA
Upstream 100 bases:
>100_bases ACATTATACTTAAAGGTCAAGGCTCTAGTATTTTGGTTTATACCAATTATTAGAGTTTTTTTATTGAGACATAAAATTTT AACAGCTGGGGGCAAGGACT
Downstream 100 bases:
>100_bases GTCCTTTTATCTAAGGTGACTAGAAAAAACGGAACCACTGCTTGTTTTAAGCAGTGGTTCTAGCTGTAGAGAAATTTCTT TGCTTGTATTTGTTTTATTT
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRKYFGFDEYGISYRTEFIGGMTTFLSMCYILVANPMILGEAGMDKGAVFTATALSAIIGTLVMGVLANYPLALAPSLGL NSFFTYSVVIGMGVAWETALAGVLVSGLVFMAITAFKIREKIIDAIPEELKYAIAGGIGFFIAFIGLKNAGIIVSHKATY VSLGNLQEPSTLLALFGFIITVVFIVKGWQGGIFYGMVVTTIVGMVAGIIDKPVAIIGGIPSLEPTFGVAFSHIPDVFNY DMLLVIFTFLFVSFFDASGTLIAVANQAGIMKNNKIPRVSQALMADASASVVGATFGTSTVTALIESSAGIAVGARTGFS SIVVAAFFFLALFFSPLLSVITTPVTAPALIIVGSMMASQINKIKWQQFDVALPAFITIIMMPLTFSVATGIALGFIMYP IIKLAMRKYQEIHPIMYGLMFIFMLYFYYIN
Sequences:
>Translated_431_residues MRKYFGFDEYGISYRTEFIGGMTTFLSMCYILVANPMILGEAGMDKGAVFTATALSAIIGTLVMGVLANYPLALAPSLGL NSFFTYSVVIGMGVAWETALAGVLVSGLVFMAITAFKIREKIIDAIPEELKYAIAGGIGFFIAFIGLKNAGIIVSHKATY VSLGNLQEPSTLLALFGFIITVVFIVKGWQGGIFYGMVVTTIVGMVAGIIDKPVAIIGGIPSLEPTFGVAFSHIPDVFNY DMLLVIFTFLFVSFFDASGTLIAVANQAGIMKNNKIPRVSQALMADASASVVGATFGTSTVTALIESSAGIAVGARTGFS SIVVAAFFFLALFFSPLLSVITTPVTAPALIIVGSMMASQINKIKWQQFDVALPAFITIIMMPLTFSVATGIALGFIMYP IIKLAMRKYQEIHPIMYGLMFIFMLYFYYIN >Mature_431_residues MRKYFGFDEYGISYRTEFIGGMTTFLSMCYILVANPMILGEAGMDKGAVFTATALSAIIGTLVMGVLANYPLALAPSLGL NSFFTYSVVIGMGVAWETALAGVLVSGLVFMAITAFKIREKIIDAIPEELKYAIAGGIGFFIAFIGLKNAGIIVSHKATY VSLGNLQEPSTLLALFGFIITVVFIVKGWQGGIFYGMVVTTIVGMVAGIIDKPVAIIGGIPSLEPTFGVAFSHIPDVFNY DMLLVIFTFLFVSFFDASGTLIAVANQAGIMKNNKIPRVSQALMADASASVVGATFGTSTVTALIESSAGIAVGARTGFS SIVVAAFFFLALFFSPLLSVITTPVTAPALIIVGSMMASQINKIKWQQFDVALPAFITIIMMPLTFSVATGIALGFIMYP IIKLAMRKYQEIHPIMYGLMFIFMLYFYYIN
Specific function: Involved in the uptake of the purine bases hypoxanthine and guanine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=416, Percent_Identity=40.8653846153846, Blast_Score=323, Evalue=1e-89, Organism=Escherichia coli, GI1790150, Length=434, Percent_Identity=41.0138248847926, Blast_Score=320, Evalue=9e-89, Organism=Escherichia coli, GI1790499, Length=421, Percent_Identity=32.0665083135392, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI48994909, Length=423, Percent_Identity=31.6784869976359, Blast_Score=189, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 46214; Mature: 46214
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYFGFDEYGISYRTEFIGGMTTFLSMCYILVANPMILGEAGMDKGAVFTATALSAIIG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHH TLVMGVLANYPLALAPSLGLNSFFTYSVVIGMGVAWETALAGVLVSGLVFMAITAFKIRE HHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KIIDAIPEELKYAIAGGIGFFIAFIGLKNAGIIVSHKATYVSLGNLQEPSTLLALFGFII HHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHH TVVFIVKGWQGGIFYGMVVTTIVGMVAGIIDKPVAIIGGIPSLEPTFGVAFSHIPDVFNY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCHHHCH DMLLVIFTFLFVSFFDASGTLIAVANQAGIMKNNKIPRVSQALMADASASVVGATFGTST HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCHHH VTALIESSAGIAVGARTGFSSIVVAAFFFLALFFSPLLSVITTPVTAPALIIVGSMMASQ HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH INKIKWQQFDVALPAFITIIMMPLTFSVATGIALGFIMYPIIKLAMRKYQEIHPIMYGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIFMLYFYYIN HHHHHHHHHCC >Mature Secondary Structure MRKYFGFDEYGISYRTEFIGGMTTFLSMCYILVANPMILGEAGMDKGAVFTATALSAIIG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHH TLVMGVLANYPLALAPSLGLNSFFTYSVVIGMGVAWETALAGVLVSGLVFMAITAFKIRE HHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KIIDAIPEELKYAIAGGIGFFIAFIGLKNAGIIVSHKATYVSLGNLQEPSTLLALFGFII HHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCHHHHHHHHHHHH TVVFIVKGWQGGIFYGMVVTTIVGMVAGIIDKPVAIIGGIPSLEPTFGVAFSHIPDVFNY HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCHHHCH DMLLVIFTFLFVSFFDASGTLIAVANQAGIMKNNKIPRVSQALMADASASVVGATFGTST HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCHHH VTALIESSAGIAVGARTGFSSIVVAAFFFLALFFSPLLSVITTPVTAPALIIVGSMMASQ HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH INKIKWQQFDVALPAFITIIMMPLTFSVATGIALGFIMYPIIKLAMRKYQEIHPIMYGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIFMLYFYYIN HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 11591660 [H]