| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300094
Identifier: 134300094
GI number: 134300094
Start: 2467286
End: 2467846
Strand: Reverse
Name: 134300094
Synonym: Dred_2253
Alternate gene names: NA
Gene position: 2467846-2467286 (Counterclockwise)
Preceding gene: 134300095
Following gene: 134300093
Centisome position: 68.4
GC content: 40.46
Gene sequence:
>561_bases ATGGAAAGATTATATTACAAGAGCGAAAGAACAAAAAGCTATTGGGAAAGCTATAATCAACCAGTTCATCATCCCTCAAT AGTATGCTGTGGGCGGCCTACTGTTGTTGTAAAGTACTCCAGTGGGGGATATATTAAACATCTCTGTGTTAGTTGCCAGA ATACCTGGAAACTAAGTTATAATGATTTTCTCCAAATTAAACTGGAAGTGTATTGTCCCCAATGTAAAAAACGGATGGAG CCCAAGAAGTTAAGAATAAACGGAAACTACGGATTTGTATGTAGGAGTTGTAAGACGGCAGTGCAACTGGCAGATATTGT GCAGGAAATTAAAGTGTATACAAATGGCTATTCACCCTCACCAGTTAGTCAAAATAAGAAAATTAACTCCGTTGTTGCCC AGGATATACCAGACCCTACAGTAATAAGCCTCTGCATAAAATGTAAACATTTTAACCAGTCCTCCTGTACGGGGCCAAAC AAAACTCGTGGTAGTTACGAACGGGGCGGGTATCAATGCTCCCAATTTAGTCGAAAGGACCCGGTAGACTTTGGGTGGTA A
Upstream 100 bases:
>100_bases CCGAAGGAATTGAAAATAGTAGCAAAGAAACCTGTGGTATTCTGTTTTTGGAGGTAATTTAGCCGTAGAGTAATAAAGAT AGAGATTAGGGTGAGAGAAA
Downstream 100 bases:
>100_bases TTTGCTAAAAAGAAACAGAATTGCTGTAGGTAAAAACGATTAATAAAATAAAATGATTCCAGTCTGCCAATACATTGTGT GTTAGGCAGTTTTTTATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MERLYYKSERTKSYWESYNQPVHHPSIVCCGRPTVVVKYSSGGYIKHLCVSCQNTWKLSYNDFLQIKLEVYCPQCKKRME PKKLRINGNYGFVCRSCKTAVQLADIVQEIKVYTNGYSPSPVSQNKKINSVVAQDIPDPTVISLCIKCKHFNQSSCTGPN KTRGSYERGGYQCSQFSRKDPVDFGW
Sequences:
>Translated_186_residues MERLYYKSERTKSYWESYNQPVHHPSIVCCGRPTVVVKYSSGGYIKHLCVSCQNTWKLSYNDFLQIKLEVYCPQCKKRME PKKLRINGNYGFVCRSCKTAVQLADIVQEIKVYTNGYSPSPVSQNKKINSVVAQDIPDPTVISLCIKCKHFNQSSCTGPN KTRGSYERGGYQCSQFSRKDPVDFGW >Mature_186_residues MERLYYKSERTKSYWESYNQPVHHPSIVCCGRPTVVVKYSSGGYIKHLCVSCQNTWKLSYNDFLQIKLEVYCPQCKKRME PKKLRINGNYGFVCRSCKTAVQLADIVQEIKVYTNGYSPSPVSQNKKINSVVAQDIPDPTVISLCIKCKHFNQSSCTGPN KTRGSYERGGYQCSQFSRKDPVDFGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21336; Mature: 21336
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLYYKSERTKSYWESYNQPVHHPSIVCCGRPTVVVKYSSGGYIKHLCVSCQNTWKLSY CCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHCCCCEEECC NDFLQIKLEVYCPQCKKRMEPKKLRINGNYGFVCRSCKTAVQLADIVQEIKVYTNGYSPS CCEEEEEEEEECCHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC PVSQNKKINSVVAQDIPDPTVISLCIKCKHFNQSSCTGPNKTRGSYERGGYQCSQFSRKD CCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC PVDFGW CCCCCC >Mature Secondary Structure MERLYYKSERTKSYWESYNQPVHHPSIVCCGRPTVVVKYSSGGYIKHLCVSCQNTWKLSY CCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHCCCCEEECC NDFLQIKLEVYCPQCKKRMEPKKLRINGNYGFVCRSCKTAVQLADIVQEIKVYTNGYSPS CCEEEEEEEEECCHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC PVSQNKKINSVVAQDIPDPTVISLCIKCKHFNQSSCTGPNKTRGSYERGGYQCSQFSRKD CCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC PVDFGW CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA