| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300072
Identifier: 134300072
GI number: 134300072
Start: 2437210
End: 2438115
Strand: Reverse
Name: 134300072
Synonym: Dred_2230
Alternate gene names: NA
Gene position: 2438115-2437210 (Counterclockwise)
Preceding gene: 134300073
Following gene: 134300071
Centisome position: 67.57
GC content: 36.87
Gene sequence:
>906_bases GTGATTAATTTCAAAAAAGTTGAATTGGCTGACAAACAATGGATGGGACCGCTTATTACCTTAGGGGAAATGAGTAGTAG TCATCAAAATTTTACCAATATATTTGCCTGGTCCGAAATCTATCATTATCGTGTGGCAAGGGTAAGTGATTATCTTGTTG TTAAAGGAAGGTTGCAAAATGGTGAACAGTATTACTTCTATCCCGCGGGTAAAGGTGATCCTAAGTCTGTAATAGAGACT ATGAAACAAGATGCAGCAGACTGTGGGCATAAATTTATAATGTTAGGAGTATCTCCAGAAAATATAATCGTGCTTAATAG TTTGTTTCCGGAGAGCTTTGAATATAAAGAGATGCGTGACAGCTTCGATTATGTTTATCTTCTAGACAAGCTAGTTACCC TGTCGGGGAATAAGCTTCACTCCAAACGCAACCATATCAATCGATTTAAGGAAAAGCATGTCTGGAGTTTTGAACAAATA TCATCTGATAATCTAGCTGAGTGCTGGGAAATGAATGTAATATGGTGTAAGGAAAATGGATGTCATGAAGATAAACAGCT TGCTGATGAAAACTGTGCTGTTTGTCGATGCTTTAATAACTTTAACGAGCTTGGTTTAGAGGGTGGACTCATTCGATTAA ATGGCAGAGTGATTGCTTACACCATGGGAGAAAAACTAAATTCTAATACCTATGTTATTCACATTGAAAAAGCCTTTAGC AAGATACAGGGAGCTTATCAAATGATTAACCGTGAATTCGCGGCTTTTATACAAGAAAAATATCCCCAACTGATGTTTGT CAATCGTGAGGAGGACATGGGCTACGAAGGATTGAGAAAGGCCAAATTATCCTACTACCCATATAGAATGGAAGAAAAAT TCATGGCAAAATATATTATTGTTTAA
Upstream 100 bases:
>100_bases GTACCAAGAATGCCTTGGAAAATATTAACAGAGAAATGACAAATAATATTTAATCAAACTAGAAGAAGAAATACGAAACT TAGAAGTGGAGAAAGCATAA
Downstream 100 bases:
>100_bases AAGATTATGATCAAAATAACTGGTACTTGGCAAGGGGTTGCAAAATGTTTGAAGTTCGACTTGCACAAAAAGGCGAGATA GTTTACCAAAAAGAAATATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQNGEQYYFYPAGKGDPKSVIET MKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRDSFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQI SSDNLAECWEMNVIWCKENGCHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYIIV
Sequences:
>Translated_301_residues MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQNGEQYYFYPAGKGDPKSVIET MKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRDSFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQI SSDNLAECWEMNVIWCKENGCHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYIIV >Mature_301_residues MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQNGEQYYFYPAGKGDPKSVIET MKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRDSFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQI SSDNLAECWEMNVIWCKENGCHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYIIV
Specific function: Unknown
COG id: COG4866
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35262; Mature: 35262
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQN CCCCEEEEECCHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECC GEQYYFYPAGKGDPKSVIETMKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRD CCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHH SFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQISSDNLAECWEMNVIWCKENG CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHCCCEEEECCCC CHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS CCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCCCEEEEEEHHHHH KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYII HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC V C >Mature Secondary Structure MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQN CCCCEEEEECCHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECC GEQYYFYPAGKGDPKSVIETMKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRD CCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHH SFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQISSDNLAECWEMNVIWCKENG CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHCCCEEEECCCC CHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS CCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCCCEEEEEEHHHHH KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYII HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA