Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is 134300072

Identifier: 134300072

GI number: 134300072

Start: 2437210

End: 2438115

Strand: Reverse

Name: 134300072

Synonym: Dred_2230

Alternate gene names: NA

Gene position: 2438115-2437210 (Counterclockwise)

Preceding gene: 134300073

Following gene: 134300071

Centisome position: 67.57

GC content: 36.87

Gene sequence:

>906_bases
GTGATTAATTTCAAAAAAGTTGAATTGGCTGACAAACAATGGATGGGACCGCTTATTACCTTAGGGGAAATGAGTAGTAG
TCATCAAAATTTTACCAATATATTTGCCTGGTCCGAAATCTATCATTATCGTGTGGCAAGGGTAAGTGATTATCTTGTTG
TTAAAGGAAGGTTGCAAAATGGTGAACAGTATTACTTCTATCCCGCGGGTAAAGGTGATCCTAAGTCTGTAATAGAGACT
ATGAAACAAGATGCAGCAGACTGTGGGCATAAATTTATAATGTTAGGAGTATCTCCAGAAAATATAATCGTGCTTAATAG
TTTGTTTCCGGAGAGCTTTGAATATAAAGAGATGCGTGACAGCTTCGATTATGTTTATCTTCTAGACAAGCTAGTTACCC
TGTCGGGGAATAAGCTTCACTCCAAACGCAACCATATCAATCGATTTAAGGAAAAGCATGTCTGGAGTTTTGAACAAATA
TCATCTGATAATCTAGCTGAGTGCTGGGAAATGAATGTAATATGGTGTAAGGAAAATGGATGTCATGAAGATAAACAGCT
TGCTGATGAAAACTGTGCTGTTTGTCGATGCTTTAATAACTTTAACGAGCTTGGTTTAGAGGGTGGACTCATTCGATTAA
ATGGCAGAGTGATTGCTTACACCATGGGAGAAAAACTAAATTCTAATACCTATGTTATTCACATTGAAAAAGCCTTTAGC
AAGATACAGGGAGCTTATCAAATGATTAACCGTGAATTCGCGGCTTTTATACAAGAAAAATATCCCCAACTGATGTTTGT
CAATCGTGAGGAGGACATGGGCTACGAAGGATTGAGAAAGGCCAAATTATCCTACTACCCATATAGAATGGAAGAAAAAT
TCATGGCAAAATATATTATTGTTTAA

Upstream 100 bases:

>100_bases
GTACCAAGAATGCCTTGGAAAATATTAACAGAGAAATGACAAATAATATTTAATCAAACTAGAAGAAGAAATACGAAACT
TAGAAGTGGAGAAAGCATAA

Downstream 100 bases:

>100_bases
AAGATTATGATCAAAATAACTGGTACTTGGCAAGGGGTTGCAAAATGTTTGAAGTTCGACTTGCACAAAAAGGCGAGATA
GTTTACCAAAAAGAAATATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQNGEQYYFYPAGKGDPKSVIET
MKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRDSFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQI
SSDNLAECWEMNVIWCKENGCHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS
KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYIIV

Sequences:

>Translated_301_residues
MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQNGEQYYFYPAGKGDPKSVIET
MKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRDSFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQI
SSDNLAECWEMNVIWCKENGCHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS
KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYIIV
>Mature_301_residues
MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQNGEQYYFYPAGKGDPKSVIET
MKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRDSFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQI
SSDNLAECWEMNVIWCKENGCHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS
KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYIIV

Specific function: Unknown

COG id: COG4866

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35262; Mature: 35262

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQN
CCCCEEEEECCHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECC
GEQYYFYPAGKGDPKSVIETMKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRD
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHH
SFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQISSDNLAECWEMNVIWCKENG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHCCCEEEECCCC
CHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS
CCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCCCEEEEEEHHHHH
KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYII
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
V
C
>Mature Secondary Structure
MINFKKVELADKQWMGPLITLGEMSSSHQNFTNIFAWSEIYHYRVARVSDYLVVKGRLQN
CCCCEEEEECCHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECC
GEQYYFYPAGKGDPKSVIETMKQDAADCGHKFIMLGVSPENIIVLNSLFPESFEYKEMRD
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHH
SFDYVYLLDKLVTLSGNKLHSKRNHINRFKEKHVWSFEQISSDNLAECWEMNVIWCKENG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHCCCEEEECCCC
CHEDKQLADENCAVCRCFNNFNELGLEGGLIRLNGRVIAYTMGEKLNSNTYVIHIEKAFS
CCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEECCCCCCCEEEEEEHHHHH
KIQGAYQMINREFAAFIQEKYPQLMFVNREEDMGYEGLRKAKLSYYPYRMEEKFMAKYII
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA