Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is 134300048

Identifier: 134300048

GI number: 134300048

Start: 2409898

End: 2410293

Strand: Reverse

Name: 134300048

Synonym: Dred_2204

Alternate gene names: NA

Gene position: 2410293-2409898 (Counterclockwise)

Preceding gene: 134300050

Following gene: 134300047

Centisome position: 66.8

GC content: 44.44

Gene sequence:

>396_bases
ATGGCGATAAGAAAAATTGTTAAAATTAATGAAGATCTATGTACTGGCTGTGGCCAATGTGTTTCCCCCTGTGCAGAAGG
TGCCATTGAACTGGTAAACGGCAAAGCAAAGGTCTTAAGGGAAGAATTATGTGACGGAGCTGGCTTTTGCTTGGGAACCT
GTCCCACCGGGGCTTTATCCCTGGAGGAGCGTGAAACTGTTGACTTTGATCATCACGCAGTTGAAGAACATATGAAGAAT
AGAGAGAAGCAAGGAATAAGTCTGCCACCAGGAGTGGAAATCAAATGCCACCTATGTGGTGCCGAAGACCATGATAGAGC
ACTTCTGCCAACCAGAATTAAAGGGGAAAGTGTTTGGACTTGTACTCGTTGTTTACCAGCACTAATTCATGGTTAA

Upstream 100 bases:

>100_bases
ACAATGGAAAAAGAAATTCGTTCCAAAGACAAATTTAATTTTTAATAACATTAAATTTGTAGGATGGGGCACAAATATAA
AAAAATAAGGAGTAATAAAT

Downstream 100 bases:

>100_bases
CATTCTTAGAAAAAGGGAATAATCCCTGTTATTGACAGCCAAAATAAAGTTGTCAAATTATATGGAGGTGTTACTATGAA
AGCATCAGTAGATCAGGATC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: 4Fe-4S Ferredoxin; 4Fe-4S Ferredoxin-Domain-Containing Protein; 4Fe-4S Protein; Ferredoxin 3-Like Protein; Ferridoxin

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAIRKIVKINEDLCTGCGQCVSPCAEGAIELVNGKAKVLREELCDGAGFCLGTCPTGALSLEERETVDFDHHAVEEHMKN
REKQGISLPPGVEIKCHLCGAEDHDRALLPTRIKGESVWTCTRCLPALIHG

Sequences:

>Translated_131_residues
MAIRKIVKINEDLCTGCGQCVSPCAEGAIELVNGKAKVLREELCDGAGFCLGTCPTGALSLEERETVDFDHHAVEEHMKN
REKQGISLPPGVEIKCHLCGAEDHDRALLPTRIKGESVWTCTRCLPALIHG
>Mature_130_residues
AIRKIVKINEDLCTGCGQCVSPCAEGAIELVNGKAKVLREELCDGAGFCLGTCPTGALSLEERETVDFDHHAVEEHMKNR
EKQGISLPPGVEIKCHLCGAEDHDRALLPTRIKGESVWTCTRCLPALIHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14195; Mature: 14063

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRKIVKINEDLCTGCGQCVSPCAEGAIELVNGKAKVLREELCDGAGFCLGTCPTGALS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCC
LEERETVDFDHHAVEEHMKNREKQGISLPPGVEIKCHLCGAEDHDRALLPTRIKGESVWT
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCHHH
CTRCLPALIHG
HHHHHHHHHCC
>Mature Secondary Structure 
AIRKIVKINEDLCTGCGQCVSPCAEGAIELVNGKAKVLREELCDGAGFCLGTCPTGALS
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCC
LEERETVDFDHHAVEEHMKNREKQGISLPPGVEIKCHLCGAEDHDRALLPTRIKGESVWT
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCHHH
CTRCLPALIHG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA