| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is ytiB [H]
Identifier: 134300014
GI number: 134300014
Start: 2371915
End: 2372472
Strand: Reverse
Name: ytiB [H]
Synonym: Dred_2168
Alternate gene names: 134300014
Gene position: 2372472-2371915 (Counterclockwise)
Preceding gene: 134300015
Following gene: 134300012
Centisome position: 65.75
GC content: 37.1
Gene sequence:
>558_bases ATGAGTCGTTTTGAAGAAATTATTGCATTTAACCAAAATTTTGTAGACCAAAAGGAATTTGAGAAATACCAAACCACAAA ATACCCCGATAAAAAGATGGTTATTCTTACCTGTATGGATACTAGGTTAACAGAATTGCTACCAAAGGCCATGAATTTAA AAAATGGGGATGCTAAAATAATTAAAAACGCTGGAGGATTAGTTTCACACCCCTTGGGTAGTATTATGCGAAGTATCTTA GTTGCTATTTATGAGCTTGGGGCAGAAGAAGTTTTTGTTATCGGGCACTATGATTGTGGAATGGCCAACATCAATCCCCA TCGCACATTAGAAAATATGGTACAACGGGGAATTTCAAAAGAAACCATAACTACCTTTGAATATGCTGGACTTAATATAG AAAGGTGGTTGCATGGTTTTGACAATGTAACAGACAGCGTAAGAAATAGTGTTCAGATTATAAAAAAGCACCCGCTAATG CCTCCAGGAATTTTGGTACATGGGTTTGTAATTGATCCGGAAACAGGAAAACTAGATGTCGTTGTTCACGGCCGTTGA
Upstream 100 bases:
>100_bases TATTTCTTGCATAAATTTAATATGGAAAATGCTAGCATAAGTTTTTTCTATGCTATAAAATAATCCTATTCTGTAGCGTA AAACGTAAAGGGTGACTGGC
Downstream 100 bases:
>100_bases GGATTCCTAAAGGGTATAACCTTACCTGTGCCCTGCGATTTGTTGTCCTTAGAATGATTGTCGTGGGGTTTACCTGGATT CGGGCAACTTCCATCCAGAT
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSRFEEIIAFNQNFVDQKEFEKYQTTKYPDKKMVILTCMDTRLTELLPKAMNLKNGDAKIIKNAGGLVSHPLGSIMRSIL VAIYELGAEEVFVIGHYDCGMANINPHRTLENMVQRGISKETITTFEYAGLNIERWLHGFDNVTDSVRNSVQIIKKHPLM PPGILVHGFVIDPETGKLDVVVHGR
Sequences:
>Translated_185_residues MSRFEEIIAFNQNFVDQKEFEKYQTTKYPDKKMVILTCMDTRLTELLPKAMNLKNGDAKIIKNAGGLVSHPLGSIMRSIL VAIYELGAEEVFVIGHYDCGMANINPHRTLENMVQRGISKETITTFEYAGLNIERWLHGFDNVTDSVRNSVQIIKKHPLM PPGILVHGFVIDPETGKLDVVVHGR >Mature_184_residues SRFEEIIAFNQNFVDQKEFEKYQTTKYPDKKMVILTCMDTRLTELLPKAMNLKNGDAKIIKNAGGLVSHPLGSIMRSILV AIYELGAEEVFVIGHYDCGMANINPHRTLENMVQRGISKETITTFEYAGLNIERWLHGFDNVTDSVRNSVQIIKKHPLMP PGILVHGFVIDPETGKLDVVVHGR
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 20914; Mature: 20782
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFEEIIAFNQNFVDQKEFEKYQTTKYPDKKMVILTCMDTRLTELLPKAMNLKNGDAKI CCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHE IKNAGGLVSHPLGSIMRSILVAIYELGAEEVFVIGHYDCGMANINPHRTLENMVQRGISK EECCCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC ETITTFEYAGLNIERWLHGFDNVTDSVRNSVQIIKKHPLMPPGILVHGFVIDPETGKLDV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEE VVHGR EEECC >Mature Secondary Structure SRFEEIIAFNQNFVDQKEFEKYQTTKYPDKKMVILTCMDTRLTELLPKAMNLKNGDAKI CHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHE IKNAGGLVSHPLGSIMRSILVAIYELGAEEVFVIGHYDCGMANINPHRTLENMVQRGISK EECCCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC ETITTFEYAGLNIERWLHGFDNVTDSVRNSVQIIKKHPLMPPGILVHGFVIDPETGKLDV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEE VVHGR EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]