| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is ilvK [H]
Identifier: 134299990
GI number: 134299990
Start: 2343826
End: 2344902
Strand: Reverse
Name: ilvK [H]
Synonym: Dred_2144
Alternate gene names: 134299990
Gene position: 2344902-2343826 (Counterclockwise)
Preceding gene: 134299991
Following gene: 134299989
Centisome position: 64.99
GC content: 40.48
Gene sequence:
>1077_bases ATGAAAATTACAGTAGAACAGTTAGAAGGAAGCCAATTAAAACCCCTGTATCAAGATGATTCCCAGCTTGGTTTTGGTCG CATATTTACCGATCGGATGTTTAGTATGCGGTTCGTCAATAATGCATGGAATGAGGCGCGTATTGAAAAATATAGATCCT TTACTCTTGATCCATCTTCTTGCGTGTTTCACTATTCCCAGGAAATTTTTGAGGGATTGAAAGCCTATGCAGCACCGGAT GGTAGAATTCTTCTTTTTAGACCTGATCAAAATGCACGAAGGATGAATCGGTCTGCAGAGCGCTTGGTCATGCCTACTAT ACCAGAGGAAGATATCATACAGGCCATTGAAGAATTGGTGTTGGCAGAAAAAAGATGGCTACCCAAGCAACCGGGGACTT CTATTTATATTAGACCCACTATGATTGCAACAGAAGCATTTTTGGGGGTTCATCCGTCTGCAGAGTATATTTTTTACGTT ATTTTAAGTCCTGTGGGAGCTTATTATAAGGGTGGTTTTAAACCCATCAGTCTTTATGTTGAGGATACCTATGTAAGAGC AAATGTGGGCGGTGTCGGAGATATTAAAACCGGCGGAAATTATGCGGCCAGTTTAATGGCAGGATACCGAGCCCAACAGA AAGGTTTTTCTCAAGTTCTGTGGTTGGATGGCCGTGAGAGGAAATATATAGAAGAAGTTGGCGCTATGAATATGTTCTTT GTTTATGGTAAAAAATTGGTAACTCCTAAACTCACAGGTTCGATCTTACCAGGTATTACCCGGGCGTCTGTATTAGAACT TGCTCGATACTTAGGATTAGAGACCGAAGAAAGAATAATAAGTATTGACGATGTTATAGATGGAATTAGTTCGGGAGAAG TTACCGAAGCCTTTGGTTCTGGGACGGCCGCTGTAATTTCTCCTGTGGGCTCTCTCTATTATAAAGAAAAGGATTTTGTT ATTAACCATAACGAAGTTGGTTCCGTTACACAAACACTTTATGATAAATTGGTTAATATTCAATACGGCAGAGAGGAAGA TCCCTTCGGTTGGGTAAGGGAAATTGGTAGATATTAA
Upstream 100 bases:
>100_bases AAATATATTTTAGTCCATGCTAAAAGGATAATTAAACATGCAGGGAGAATTCTTAATGACAATTAACTCGGCTATGGTAT AAAACGGGAGTGTGAACAAA
Downstream 100 bases:
>100_bases AAATGAGTTATTATTTAAGTAGTGGTGCCATCTTCAGCTTTCCAAGGGGGCTTTAGCCTCCTTGGAAAAAATTAATGATT AGCAGTGGCAAGAATTATAA
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKITVEQLEGSQLKPLYQDDSQLGFGRIFTDRMFSMRFVNNAWNEARIEKYRSFTLDPSSCVFHYSQEIFEGLKAYAAPD GRILLFRPDQNARRMNRSAERLVMPTIPEEDIIQAIEELVLAEKRWLPKQPGTSIYIRPTMIATEAFLGVHPSAEYIFYV ILSPVGAYYKGGFKPISLYVEDTYVRANVGGVGDIKTGGNYAASLMAGYRAQQKGFSQVLWLDGRERKYIEEVGAMNMFF VYGKKLVTPKLTGSILPGITRASVLELARYLGLETEERIISIDDVIDGISSGEVTEAFGSGTAAVISPVGSLYYKEKDFV INHNEVGSVTQTLYDKLVNIQYGREEDPFGWVREIGRY
Sequences:
>Translated_358_residues MKITVEQLEGSQLKPLYQDDSQLGFGRIFTDRMFSMRFVNNAWNEARIEKYRSFTLDPSSCVFHYSQEIFEGLKAYAAPD GRILLFRPDQNARRMNRSAERLVMPTIPEEDIIQAIEELVLAEKRWLPKQPGTSIYIRPTMIATEAFLGVHPSAEYIFYV ILSPVGAYYKGGFKPISLYVEDTYVRANVGGVGDIKTGGNYAASLMAGYRAQQKGFSQVLWLDGRERKYIEEVGAMNMFF VYGKKLVTPKLTGSILPGITRASVLELARYLGLETEERIISIDDVIDGISSGEVTEAFGSGTAAVISPVGSLYYKEKDFV INHNEVGSVTQTLYDKLVNIQYGREEDPFGWVREIGRY >Mature_358_residues MKITVEQLEGSQLKPLYQDDSQLGFGRIFTDRMFSMRFVNNAWNEARIEKYRSFTLDPSSCVFHYSQEIFEGLKAYAAPD GRILLFRPDQNARRMNRSAERLVMPTIPEEDIIQAIEELVLAEKRWLPKQPGTSIYIRPTMIATEAFLGVHPSAEYIFYV ILSPVGAYYKGGFKPISLYVEDTYVRANVGGVGDIKTGGNYAASLMAGYRAQQKGFSQVLWLDGRERKYIEEVGAMNMFF VYGKKLVTPKLTGSILPGITRASVLELARYLGLETEERIISIDDVIDGISSGEVTEAFGSGTAAVISPVGSLYYKEKDFV INHNEVGSVTQTLYDKLVNIQYGREEDPFGWVREIGRY
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=337, Percent_Identity=41.5430267062315, Blast_Score=265, Evalue=3e-71, Organism=Homo sapiens, GI38176287, Length=337, Percent_Identity=41.5430267062315, Blast_Score=265, Evalue=4e-71, Organism=Homo sapiens, GI296010906, Length=337, Percent_Identity=41.5430267062315, Blast_Score=265, Evalue=4e-71, Organism=Homo sapiens, GI50658084, Length=329, Percent_Identity=39.8176291793313, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI296010902, Length=337, Percent_Identity=36.2017804154303, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI296010900, Length=337, Percent_Identity=36.2017804154303, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI258614015, Length=284, Percent_Identity=40.1408450704225, Blast_Score=212, Evalue=4e-55, Organism=Escherichia coli, GI48994963, Length=321, Percent_Identity=29.9065420560748, Blast_Score=130, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17568601, Length=366, Percent_Identity=39.0710382513661, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17565728, Length=359, Percent_Identity=36.2116991643454, Blast_Score=191, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6322002, Length=339, Percent_Identity=44.5427728613569, Blast_Score=273, Evalue=2e-74, Organism=Saccharomyces cerevisiae, GI6322608, Length=360, Percent_Identity=41.6666666666667, Blast_Score=260, Evalue=2e-70, Organism=Drosophila melanogaster, GI24641779, Length=361, Percent_Identity=39.8891966759003, Blast_Score=259, Evalue=2e-69,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 40387; Mature: 40387
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITVEQLEGSQLKPLYQDDSQLGFGRIFTDRMFSMRFVNNAWNEARIEKYRSFTLDPSS CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH CVFHYSQEIFEGLKAYAAPDGRILLFRPDQNARRMNRSAERLVMPTIPEEDIIQAIEELV HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCHHHEECCCCCHHHHHHHHHHHH LAEKRWLPKQPGTSIYIRPTMIATEAFLGVHPSAEYIFYVILSPVGAYYKGGFKPISLYV HHHHHCCCCCCCCEEEEECHHHHHHHHHCCCCCHHEEEEEEEHHHHHHHCCCCEEEEEEE EDTYVRANVGGVGDIKTGGNYAASLMAGYRAQQKGFSQVLWLDGRERKYIEEVGAMNMFF EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEE VYGKKLVTPKLTGSILPGITRASVLELARYLGLETEERIISIDDVIDGISSGEVTEAFGS ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHHHHCCCCCCCHHHHHCC GTAAVISPVGSLYYKEKDFVINHNEVGSVTQTLYDKLVNIQYGREEDPFGWVREIGRY CCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MKITVEQLEGSQLKPLYQDDSQLGFGRIFTDRMFSMRFVNNAWNEARIEKYRSFTLDPSS CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHH CVFHYSQEIFEGLKAYAAPDGRILLFRPDQNARRMNRSAERLVMPTIPEEDIIQAIEELV HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCCHHHEECCCCCHHHHHHHHHHHH LAEKRWLPKQPGTSIYIRPTMIATEAFLGVHPSAEYIFYVILSPVGAYYKGGFKPISLYV HHHHHCCCCCCCCEEEEECHHHHHHHHHCCCCCHHEEEEEEEHHHHHHHCCCCEEEEEEE EDTYVRANVGGVGDIKTGGNYAASLMAGYRAQQKGFSQVLWLDGRERKYIEEVGAMNMFF EEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEE VYGKKLVTPKLTGSILPGITRASVLELARYLGLETEERIISIDDVIDGISSGEVTEAFGS ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEHHHHHCCCCCCCHHHHHCC GTAAVISPVGSLYYKEKDFVINHNEVGSVTQTLYDKLVNIQYGREEDPFGWVREIGRY CCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]