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The map label for this gene is csoR [H]

Identifier: 134299987

GI number: 134299987

Start: 2340826

End: 2341158

Strand: Reverse

Name: csoR [H]

Synonym: Dred_2141

Alternate gene names: 134299987

Gene position: 2341158-2340826 (Counterclockwise)

Preceding gene: 134299988

Following gene: 134299986

Centisome position: 64.89

GC content: 37.24

Gene sequence:

>333_bases
ATGGATCAAATAGAAAAAACACCTTGTGTAGGTTGTCAGGGAAATGCAACCAATAATCGACTAAGCCATCACGACGAGAG
AACCATTAAGGAACTTGTAAATCGGATTAATCGCATAGAGGGACAGTTACGTGGTATTAAGGGAATGATTGAGAGACATG
TTTACTGTGATGAAATATTAAATCAGATTTCTTCGGCTAATGCTGCTTTACACGGGGTAGCTAAATTGTTGCTGGAGAAA
CACATGAAATCCTGTATTTTAGAACAACTACAGGAGGGTGACGAACAGGTCATTGATGAAGTACTGAAAACTATTTTTAA
AATGATGAGATAA

Upstream 100 bases:

>100_bases
CTATATTCTTGGAACAATAATACCATGTATAATGTTGCAGATATTCTTGACTAAATAGGGTAGGGGGGTATACTATACTA
TCAAGGGCGGTGATAAGGAT

Downstream 100 bases:

>100_bases
GTTAATAGGTGGTGATGAAAGTGGAAAACCAAAGGACGAAGGTAATGGAAAATCAAACACAGGTCACAGAGAAAAATAAT
CTAGCAACATGTACCATACC

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDQIEKTPCVGCQGNATNNRLSHHDERTIKELVNRINRIEGQLRGIKGMIERHVYCDEILNQISSANAALHGVAKLLLEK
HMKSCILEQLQEGDEQVIDEVLKTIFKMMR

Sequences:

>Translated_110_residues
MDQIEKTPCVGCQGNATNNRLSHHDERTIKELVNRINRIEGQLRGIKGMIERHVYCDEILNQISSANAALHGVAKLLLEK
HMKSCILEQLQEGDEQVIDEVLKTIFKMMR
>Mature_110_residues
MDQIEKTPCVGCQGNATNNRLSHHDERTIKELVNRINRIEGQLRGIKGMIERHVYCDEILNQISSANAALHGVAKLLLEK
HMKSCILEQLQEGDEQVIDEVLKTIFKMMR

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 12582; Mature: 12582

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQIEKTPCVGCQGNATNNRLSHHDERTIKELVNRINRIEGQLRGIKGMIERHVYCDEIL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQISSANAALHGVAKLLLEKHMKSCILEQLQEGDEQVIDEVLKTIFKMMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDQIEKTPCVGCQGNATNNRLSHHDERTIKELVNRINRIEGQLRGIKGMIERHVYCDEIL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQISSANAALHGVAKLLLEKHMKSCILEQLQEGDEQVIDEVLKTIFKMMR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]