| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is coaD
Identifier: 134299930
GI number: 134299930
Start: 2281106
End: 2281591
Strand: Reverse
Name: coaD
Synonym: Dred_2084
Alternate gene names: 134299930
Gene position: 2281591-2281106 (Counterclockwise)
Preceding gene: 134299931
Following gene: 134299929
Centisome position: 63.24
GC content: 40.12
Gene sequence:
>486_bases ATGCGTATAGGAGTTTACCCCGGTAGTTTTGACCCAGTTACCAATGGACACATGGATATCGTAGAACGATCTGTGGGACT TTTTGATCGTCTTATTGTTGCAGTGGCGAAAAATGCACAAAAAAAACCGCTTTTCTCGGTGGAGGAGCGGGTTGAAATAT TGAAAAATGTTCTGAAAAAATATCCGAATATTGTTGTGGACACCTTTGACGGCCTTACCGTAACCTATGCATTGCAACAG GGGGCCATTGCCATTGTACGCGGGCTTAGGGCCTTTTCAGATTTTGAAAATGAATTTATTTTTGCCTTAACCAATAAAAA ATTGGCACCAGATCTTGAAACTGTTTATCTGATGACCAGGGCAGAATATTCTTTCATTAGTTCCACAACGGTTAAGGAAG TGGCCTCATTTAAAGGCTCCTTAAGTGGTATGGTTCCAGAGATTGTAGCTCAAAAAATACAAGACAAATATGGCTATGGT AAATAA
Upstream 100 bases:
>100_bases GCCGCCGGATCTAGTGGGAAATCTAACCGCAACTCGAAGAGAACGGTATGGCGATACAGCGTTGACATTCTATAGGCTTC CCAGTTGAGGAGGAATATGG
Downstream 100 bases:
>100_bases CCAAGGAGGGATATAACTGTGGAGCTCTTTAATATCCTGAATGAGCTGGAGGAACTCATTGAGGAGAGCCCCAAGGTGCC AATGACCAAACGAGTCATGG
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRIGVYPGSFDPVTNGHMDIVERSVGLFDRLIVAVAKNAQKKPLFSVEERVEILKNVLKKYPNIVVDTFDGLTVTYALQQ GAIAIVRGLRAFSDFENEFIFALTNKKLAPDLETVYLMTRAEYSFISSTTVKEVASFKGSLSGMVPEIVAQKIQDKYGYG K
Sequences:
>Translated_161_residues MRIGVYPGSFDPVTNGHMDIVERSVGLFDRLIVAVAKNAQKKPLFSVEERVEILKNVLKKYPNIVVDTFDGLTVTYALQQ GAIAIVRGLRAFSDFENEFIFALTNKKLAPDLETVYLMTRAEYSFISSTTVKEVASFKGSLSGMVPEIVAQKIQDKYGYG K >Mature_161_residues MRIGVYPGSFDPVTNGHMDIVERSVGLFDRLIVAVAKNAQKKPLFSVEERVEILKNVLKKYPNIVVDTFDGLTVTYALQQ GAIAIVRGLRAFSDFENEFIFALTNKKLAPDLETVYLMTRAEYSFISSTTVKEVASFKGSLSGMVPEIVAQKIQDKYGYG K
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=155, Percent_Identity=44.5161290322581, Blast_Score=150, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_DESRM (A4J698)
Other databases:
- EMBL: CP000612 - RefSeq: YP_001113426.1 - ProteinModelPortal: A4J698 - SMR: A4J698 - STRING: A4J698 - GeneID: 4957660 - GenomeReviews: CP000612_GR - KEGG: drm:Dred_2084 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - PhylomeDB: A4J698 - ProtClustDB: PRK00168 - BioCyc: DRED349161:DRED_2084-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 17935; Mature: 17935
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGVYPGSFDPVTNGHMDIVERSVGLFDRLIVAVAKNAQKKPLFSVEERVEILKNVLKK CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH YPNIVVDTFDGLTVTYALQQGAIAIVRGLRAFSDFENEFIFALTNKKLAPDLETVYLMTR CCCEEEECCCCCEEEEHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH AEYSFISSTTVKEVASFKGSLSGMVPEIVAQKIQDKYGYGK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MRIGVYPGSFDPVTNGHMDIVERSVGLFDRLIVAVAKNAQKKPLFSVEERVEILKNVLKK CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH YPNIVVDTFDGLTVTYALQQGAIAIVRGLRAFSDFENEFIFALTNKKLAPDLETVYLMTR CCCEEEECCCCCEEEEHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHH AEYSFISSTTVKEVASFKGSLSGMVPEIVAQKIQDKYGYGK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA