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The map label for this gene is 134299900

Identifier: 134299900

GI number: 134299900

Start: 2250539

End: 2250766

Strand: Reverse

Name: 134299900

Synonym: Dred_2054

Alternate gene names: NA

Gene position: 2250766-2250539 (Counterclockwise)

Preceding gene: 134299901

Following gene: 134299899

Centisome position: 62.38

GC content: 45.61

Gene sequence:

>228_bases
GTGAAAGAACTTGTAGAAATACTTGCCAAAGCCTTGGTAGATCAACCGGACAAAGTTGAGGTAACCATGGTGGAAAAGGA
AAGATCCGTGGTTATTGAGCTTAGGGTGGCACCCGAAGATATGGGTAAAGTCATTGGTAAACAAGGGCGTATTGCCCGGG
CCATTCGTTCGGTGGTTAAGGCTGCGGCAACAAAGCAGCGCAAAAAAGTTGTAGTTGAAATTGTTTAG

Upstream 100 bases:

>100_bases
GCTTTCTGATACTGCCAAGTCACTGTTCGTAAAAGCCGGTATTATCCCAGGTCGGGCCAAGACCAATGAGGCCTAAGGTT
TCCAGGGGAGGTCCAGAACT

Downstream 100 bases:

>100_bases
CGGTTGGATAACCGGTTTGTAAAGGGGGCTGCAAAGCCTCCTTTACTATCATCTAGGGGGTAATTCAATGTTAACCATTA
CTCGCCCTGTTATGGTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MKELVEILAKALVDQPDKVEVTMVEKERSVVIELRVAPEDMGKVIGKQGRIARAIRSVVKAAATKQRKKVVVEIV

Sequences:

>Translated_75_residues
MKELVEILAKALVDQPDKVEVTMVEKERSVVIELRVAPEDMGKVIGKQGRIARAIRSVVKAAATKQRKKVVVEIV
>Mature_75_residues
MKELVEILAKALVDQPDKVEVTMVEKERSVVIELRVAPEDMGKVIGKQGRIARAIRSVVKAAATKQRKKVVVEIV

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 8322; Mature: 8322

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELVEILAKALVDQPDKVEVTMVEKERSVVIELRVAPEDMGKVIGKQGRIARAIRSVVK
CHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEECHHHHHHHHCCCCHHHHHHHHHHH
AAATKQRKKVVVEIV
HHHHHHHHHEEEEEC
>Mature Secondary Structure
MKELVEILAKALVDQPDKVEVTMVEKERSVVIELRVAPEDMGKVIGKQGRIARAIRSVVK
CHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEEECHHHHHHHHCCCCHHHHHHHHHHH
AAATKQRKKVVVEIV
HHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]