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The map label for this gene is yfmS [H]

Identifier: 134299873

GI number: 134299873

Start: 2230475

End: 2231302

Strand: Reverse

Name: yfmS [H]

Synonym: Dred_2027

Alternate gene names: 134299873

Gene position: 2231302-2230475 (Counterclockwise)

Preceding gene: 134299875

Following gene: 134299871

Centisome position: 61.84

GC content: 42.03

Gene sequence:

>828_bases
ATGTACGGACAGGATTGGCAAGAAATCATTAATACAGCAAAGAGCTTCAAAAATCTTTTAGGTCCAGAGGTAGTGGTTGT
TGTGAGTGACAATGAGAAATTTGTCTACTATGAGTCTGGTTCTTCACTAGATTTAGGAATTAAAATAGGTGACCCCATTA
GGCAGGGCAGTATTACAGAGCAAATATTACATAGTAAGAGAAGAGTTATAAGAAAGGTGGGTAGCCATCTGTACGGTGTA
CCATACATCGGCATGGGTTCTCCTATCTTTGATGGAAATAACCAAGTGGTTGGTACTATCTCCGTTGGCCAGCCTACTAC
TACACAGGAAGCGTTACTTGAAGATGCAAAAAAATTAGAAACATCCATGGATACAATAAGTCAAACCACAACCAATCTTT
CGGCTGCCTCTCAGCAATTGGCTGCAACTGCCAGTAATTTATCGGGACAAGCTGATGCAATCAATGAAAATGTACAAAAA
ACAGATGTGGTTCTGAATCTAATTAAAGACGTTGCAGCTCAAACCCATCTCCTTGGCTTAAATGCAGCCATTGAGGCTGC
CAGGGCTGGGGAGCAGGGAAGAGGGTTTAATGTGGTTGCGGAGGAAATAAGAAAGTTGGCTGGCCGTACAACCGGGTCAG
TTAAAGAGATTTCCGATACACTCAATTTAATCAGGTCTGCTATTCAGGAACTAAGTGGACAGACGCATCAGATAGCGGCA
GTGTCAGAGGAACAATCTGCTTCCGTAGAGGAAATTGCTGCATCTATACATGATGTTGTGCTGATGTCCAAAGAATTAAA
ACTATTGGCAGATAACCTAACAAACTAG

Upstream 100 bases:

>100_bases
CGCAAAGCCATGGGTCTAATGCATTTGCAATGATAGCCAGGCAGCATAATTACACCAAGCAGTGAGGGTATGTTTTATTT
TTTACAGGGGAGATGGGGCT

Downstream 100 bases:

>100_bases
TCTAGGGACAATATGCGGTCATAGTCCGATGGGTGGACAGTAGCTAAGGGTAAGCAATAGATCCTTATGTAAAGGGACAG
ATATTTTGAATATGTCGGTC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MYGQDWQEIINTAKSFKNLLGPEVVVVVSDNEKFVYYESGSSLDLGIKIGDPIRQGSITEQILHSKRRVIRKVGSHLYGV
PYIGMGSPIFDGNNQVVGTISVGQPTTTQEALLEDAKKLETSMDTISQTTTNLSAASQQLAATASNLSGQADAINENVQK
TDVVLNLIKDVAAQTHLLGLNAAIEAARAGEQGRGFNVVAEEIRKLAGRTTGSVKEISDTLNLIRSAIQELSGQTHQIAA
VSEEQSASVEEIAASIHDVVLMSKELKLLADNLTN

Sequences:

>Translated_275_residues
MYGQDWQEIINTAKSFKNLLGPEVVVVVSDNEKFVYYESGSSLDLGIKIGDPIRQGSITEQILHSKRRVIRKVGSHLYGV
PYIGMGSPIFDGNNQVVGTISVGQPTTTQEALLEDAKKLETSMDTISQTTTNLSAASQQLAATASNLSGQADAINENVQK
TDVVLNLIKDVAAQTHLLGLNAAIEAARAGEQGRGFNVVAEEIRKLAGRTTGSVKEISDTLNLIRSAIQELSGQTHQIAA
VSEEQSASVEEIAASIHDVVLMSKELKLLADNLTN
>Mature_275_residues
MYGQDWQEIINTAKSFKNLLGPEVVVVVSDNEKFVYYESGSSLDLGIKIGDPIRQGSITEQILHSKRRVIRKVGSHLYGV
PYIGMGSPIFDGNNQVVGTISVGQPTTTQEALLEDAKKLETSMDTISQTTTNLSAASQQLAATASNLSGQADAINENVQK
TDVVLNLIKDVAAQTHLLGLNAAIEAARAGEQGRGFNVVAEEIRKLAGRTTGSVKEISDTLNLIRSAIQELSGQTHQIAA
VSEEQSASVEEIAASIHDVVLMSKELKLLADNLTN

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=255, Percent_Identity=30.5882352941176, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788195, Length=216, Percent_Identity=31.9444444444444, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1789453, Length=130, Percent_Identity=36.9230769230769, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787690, Length=204, Percent_Identity=32.3529411764706, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1788194, Length=208, Percent_Identity=31.7307692307692, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 29458; Mature: 29458

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGQDWQEIINTAKSFKNLLGPEVVVVVSDNEKFVYYESGSSLDLGIKIGDPIRQGSITE
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCHHCCCHHH
QILHSKRRVIRKVGSHLYGVPYIGMGSPIFDGNNQVVGTISVGQPTTTQEALLEDAKKLE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHHHH
TSMDTISQTTTNLSAASQQLAATASNLSGQADAINENVQKTDVVLNLIKDVAAQTHLLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAIEAARAGEQGRGFNVVAEEIRKLAGRTTGSVKEISDTLNLIRSAIQELSGQTHQIAA
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
VSEEQSASVEEIAASIHDVVLMSKELKLLADNLTN
ECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYGQDWQEIINTAKSFKNLLGPEVVVVVSDNEKFVYYESGSSLDLGIKIGDPIRQGSITE
CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEEEEEECCCHHCCCHHH
QILHSKRRVIRKVGSHLYGVPYIGMGSPIFDGNNQVVGTISVGQPTTTQEALLEDAKKLE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEECCCCCCHHHHHHHHHHHHH
TSMDTISQTTTNLSAASQQLAATASNLSGQADAINENVQKTDVVLNLIKDVAAQTHLLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAIEAARAGEQGRGFNVVAEEIRKLAGRTTGSVKEISDTLNLIRSAIQELSGQTHQIAA
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
VSEEQSASVEEIAASIHDVVLMSKELKLLADNLTN
ECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]