Click here to switch to the map view.

The map label for this gene is 134299867

Identifier: 134299867

GI number: 134299867

Start: 2221770

End: 2222144

Strand: Reverse

Name: 134299867

Synonym: Dred_2021

Alternate gene names: NA

Gene position: 2222144-2221770 (Counterclockwise)

Preceding gene: 134299870

Following gene: 134299865

Centisome position: 61.59

GC content: 36.27

Gene sequence:

>375_bases
ATGTTCGAAAGGAAAACTCACATGATAAAAGATTATCATGATCTTGAAGTGTACAAGAGGGGATATAAACTGGCTCTTCA
AATACACAAAACAACAAAGGGTTTTCCGCAGCATGAGTTGTATGAGATAGGGAGCCAAATAAGACGTGCGGCCGTATCAA
TACCGCTTAATATAGCCGAAGGATACGGTAGAAAGAACTATGTAGATGATTTTAAGAGGTTCTTAATAAATGCACTTGGA
TCCTGTAATGAGGTTGCAGTTTTACTAGATATGATCAAAGACCTTGGATATATATCAGATCAGTATGAAGGTTTTAAAGA
GGAATACGATCATCTAGGAAGGCAACTAAACAAACTGATACAAACTTGGAAATAA

Upstream 100 bases:

>100_bases
CGTAATAGCTCACTGGTCAAGTGACCCTGCGCCGAAAATGTAACGGGGCTAAGTATATCACCGAAGCTTTGGATTCTCGA
GGTTCGATATTCGAGATTCG

Downstream 100 bases:

>100_bases
TCGAATTTCGAAATTCGAATATCGAACTTCGAGAATGGTAGGGGAGCGTTCTTACCACATTGAAGCAGTACCGAAAGGAG
CTGTGGAGAGGTAAGAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: 23S Ribosomal Protein; S23 Ribosomal; 30S Ribosomal Protein S; Intervening Sequence

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MFERKTHMIKDYHDLEVYKRGYKLALQIHKTTKGFPQHELYEIGSQIRRAAVSIPLNIAEGYGRKNYVDDFKRFLINALG
SCNEVAVLLDMIKDLGYISDQYEGFKEEYDHLGRQLNKLIQTWK

Sequences:

>Translated_124_residues
MFERKTHMIKDYHDLEVYKRGYKLALQIHKTTKGFPQHELYEIGSQIRRAAVSIPLNIAEGYGRKNYVDDFKRFLINALG
SCNEVAVLLDMIKDLGYISDQYEGFKEEYDHLGRQLNKLIQTWK
>Mature_124_residues
MFERKTHMIKDYHDLEVYKRGYKLALQIHKTTKGFPQHELYEIGSQIRRAAVSIPLNIAEGYGRKNYVDDFKRFLINALG
SCNEVAVLLDMIKDLGYISDQYEGFKEEYDHLGRQLNKLIQTWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14630; Mature: 14630

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERKTHMIKDYHDLEVYKRGYKLALQIHKTTKGFPQHELYEIGSQIRRAAVSIPLNIAE
CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
GYGRKNYVDDFKRFLINALGSCNEVAVLLDMIKDLGYISDQYEGFKEEYDHLGRQLNKLI
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTWK
HHCC
>Mature Secondary Structure
MFERKTHMIKDYHDLEVYKRGYKLALQIHKTTKGFPQHELYEIGSQIRRAAVSIPLNIAE
CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHH
GYGRKNYVDDFKRFLINALGSCNEVAVLLDMIKDLGYISDQYEGFKEEYDHLGRQLNKLI
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTWK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA