| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is ybhI [C]
Identifier: 134299838
GI number: 134299838
Start: 2188114
End: 2189565
Strand: Reverse
Name: ybhI [C]
Synonym: Dred_1991
Alternate gene names: 134299838
Gene position: 2189565-2188114 (Counterclockwise)
Preceding gene: 134299839
Following gene: 134299837
Centisome position: 60.68
GC content: 42.98
Gene sequence:
>1452_bases ATGAGCGAAAACATAAAGCGAATAGCATTTATTCTTTTAGGTGTTGCACTTTTCTTAGGGTTTTATTTTGCGCCGCAATT TAGTCCAGCCATTGACCCTTCCGGAAAAGCCTTTGATTTATCCCAGGAAGGTAAAGCTGCCATTGGTCTTTTCTTGCTGG CGGGTATTTGGTGGGTCTTTGAGGTTACTCCCATTGGTGTAACAAGTATTGCCATCGGTGTTGTTCAGGCCTTGTTTCTT ATCCGGCCAGCAAAAGAGGCCTTTAGGGATTTTATGGATCCCACTGTAATGTTTATTTTAGGATCATTATTAATTGGCTT AGCCTTTACTAAGGCTGGTATCACCAAGCGTCTTGCTTATAAAATGCTGGATGTTGTGGGTGAGGATACAAGAAAAATTC TACTAGGAGTTTTTGTCATTACGGCTTTGTTAACTCATATTATGGCTCACACCGCGGTAGCTGCTACGATGTTCCCAATA TTGGTTACCATTTTAGCATTATACGGCGAAAATCCAGACGGCAAACCCACTAATTTTGGTAAGGCACTATTCATTGGCAT GGCCTACACTGCTGGTGCAGGAAGTATTTGTACCTTACTTGGCGGGGCCCGCAATCCTGCGGCAGTGGGTTTTTACACAG AGTTTACTGGAGCAGAGGTATCTTTCCTTGAATTTTCTGCACATCTGGCTCCCTTTGGCTGGCTGACTGTATTTTTGCTA TGGGCATTATTACTGATTATTTATAAACCAGAAAAAACAAAGATTCCGGGACTTAGGGAAAAAGCAAGGATTGAATATGC AAAATTAGGTCCTGTCAACAAGCAAGAAATCTTTGTAGGGATTGTTGTATTCTGCGCATTGGCCATGTTGGTTCTCCAGG CTATTATTCCTGCATTAAAGCCAATGGATCGTTCTGTTCCTTTGCTACTGGCTGGCTTATTGTTCTTTTTGTCCAATATT TTAACCGTCGAAGATTTAGAAAAGAAGATCCCTTGGAACATTGTATTGCTCTTCTCCGGGGCCATGAGTATTGGCTTCTG CCTCTGGAAGACTGGCGCCGCCCAGTGGATTGCCGTTAAATGGTTAGCCATGCTGGTAGATGCTCACTGGTTAGTATTTG TACTGGGCATTTGTTTCTTAGTTATGATTATGACCAACTTTATCATGAACGTTGCAGCCATTGCGATCACCTTACCGGTT GCTTTGGTTATTGCTCAATATCTAGGTGTAAACCCTGAACTTATTCTCTATGGAGCCACCGCAATGGCTGGTATGCCCTT CCTGCTGTTGATTGGTGCAGCCCCCAACGCAATGGCCTATGAATCTAAACAGTTTACAACAGGAGAATTCTTCAAGACAG GAATTCCGGCCAGCGCTATGCTTCTTTGCATATTAGTACTAATGACCTTTACCTACTGGCCGTTAATAGGGATGTCAGCC TTGATACATTAA
Upstream 100 bases:
>100_bases AAGGGGATGATAAAAAAAGACGACGATTAATAAGTGGGTGGTTTAGGACCTATTTCATAAAAGCACCTGGTACGGAAAAA TGTTAAAAGGGGTGTATGTA
Downstream 100 bases:
>100_bases AGTTGGCAGCAACCCCTAAACTACAAGAAGATTTCGTTGACTGTTGGCACACCTGGAGTATAATTTCAGGTGTGTCAACA TAAAAATGGCATCTAAATTA
Product: anion transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MSENIKRIAFILLGVALFLGFYFAPQFSPAIDPSGKAFDLSQEGKAAIGLFLLAGIWWVFEVTPIGVTSIAIGVVQALFL IRPAKEAFRDFMDPTVMFILGSLLIGLAFTKAGITKRLAYKMLDVVGEDTRKILLGVFVITALLTHIMAHTAVAATMFPI LVTILALYGENPDGKPTNFGKALFIGMAYTAGAGSICTLLGGARNPAAVGFYTEFTGAEVSFLEFSAHLAPFGWLTVFLL WALLLIIYKPEKTKIPGLREKARIEYAKLGPVNKQEIFVGIVVFCALAMLVLQAIIPALKPMDRSVPLLLAGLLFFLSNI LTVEDLEKKIPWNIVLLFSGAMSIGFCLWKTGAAQWIAVKWLAMLVDAHWLVFVLGICFLVMIMTNFIMNVAAIAITLPV ALVIAQYLGVNPELILYGATAMAGMPFLLLIGAAPNAMAYESKQFTTGEFFKTGIPASAMLLCILVLMTFTYWPLIGMSA LIH
Sequences:
>Translated_483_residues MSENIKRIAFILLGVALFLGFYFAPQFSPAIDPSGKAFDLSQEGKAAIGLFLLAGIWWVFEVTPIGVTSIAIGVVQALFL IRPAKEAFRDFMDPTVMFILGSLLIGLAFTKAGITKRLAYKMLDVVGEDTRKILLGVFVITALLTHIMAHTAVAATMFPI LVTILALYGENPDGKPTNFGKALFIGMAYTAGAGSICTLLGGARNPAAVGFYTEFTGAEVSFLEFSAHLAPFGWLTVFLL WALLLIIYKPEKTKIPGLREKARIEYAKLGPVNKQEIFVGIVVFCALAMLVLQAIIPALKPMDRSVPLLLAGLLFFLSNI LTVEDLEKKIPWNIVLLFSGAMSIGFCLWKTGAAQWIAVKWLAMLVDAHWLVFVLGICFLVMIMTNFIMNVAAIAITLPV ALVIAQYLGVNPELILYGATAMAGMPFLLLIGAAPNAMAYESKQFTTGEFFKTGIPASAMLLCILVLMTFTYWPLIGMSA LIH >Mature_482_residues SENIKRIAFILLGVALFLGFYFAPQFSPAIDPSGKAFDLSQEGKAAIGLFLLAGIWWVFEVTPIGVTSIAIGVVQALFLI RPAKEAFRDFMDPTVMFILGSLLIGLAFTKAGITKRLAYKMLDVVGEDTRKILLGVFVITALLTHIMAHTAVAATMFPIL VTILALYGENPDGKPTNFGKALFIGMAYTAGAGSICTLLGGARNPAAVGFYTEFTGAEVSFLEFSAHLAPFGWLTVFLLW ALLLIIYKPEKTKIPGLREKARIEYAKLGPVNKQEIFVGIVVFCALAMLVLQAIIPALKPMDRSVPLLLAGLLFFLSNIL TVEDLEKKIPWNIVLLFSGAMSIGFCLWKTGAAQWIAVKWLAMLVDAHWLVFVLGICFLVMIMTNFIMNVAAIAITLPVA LVIAQYLGVNPELILYGATAMAGMPFLLLIGAAPNAMAYESKQFTTGEFFKTGIPASAMLLCILVLMTFTYWPLIGMSAL IH
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Homo sapiens, GI29171306, Length=504, Percent_Identity=25, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI301069346, Length=485, Percent_Identity=23.9175257731959, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI219802232, Length=449, Percent_Identity=24.9443207126949, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI31795546, Length=340, Percent_Identity=24.4117647058824, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI301069349, Length=323, Percent_Identity=26.0061919504644, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI58761541, Length=347, Percent_Identity=25.0720461095101, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI301069353, Length=347, Percent_Identity=25.0720461095101, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI31377715, Length=347, Percent_Identity=25.0720461095101, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988385, Length=444, Percent_Identity=22.2972972972973, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71989118, Length=509, Percent_Identity=22.7897838899804, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI32564681, Length=485, Percent_Identity=23.0927835051546, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI32565804, Length=426, Percent_Identity=22.0657276995305, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322263, Length=493, Percent_Identity=22.3123732251521, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI45551633, Length=478, Percent_Identity=21.9665271966527, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI281366409, Length=478, Percent_Identity=22.1757322175732, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI17737623, Length=478, Percent_Identity=22.1757322175732, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24666468, Length=478, Percent_Identity=22.1757322175732, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI281362116, Length=488, Percent_Identity=22.9508196721311, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI281362114, Length=489, Percent_Identity=23.3128834355828, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI281362112, Length=489, Percent_Identity=23.3128834355828, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001898 [H]
Pfam domain/function: PF00939 Na_sulph_symp [H]
EC number: NA
Molecular weight: Translated: 52484; Mature: 52353
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENIKRIAFILLGVALFLGFYFAPQFSPAIDPSGKAFDLSQEGKAAIGLFLLAGIWWVF CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHH EVTPIGVTSIAIGVVQALFLIRPAKEAFRDFMDPTVMFILGSLLIGLAFTKAGITKRLAY HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH KMLDVVGEDTRKILLGVFVITALLTHIMAHTAVAATMFPILVTILALYGENPDGKPTNFG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KALFIGMAYTAGAGSICTLLGGARNPAAVGFYTEFTGAEVSFLEFSAHLAPFGWLTVFLL HHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHHHHCHHHHHHHHHH WALLLIIYKPEKTKIPGLREKARIEYAKLGPVNKQEIFVGIVVFCALAMLVLQAIIPALK HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PMDRSVPLLLAGLLFFLSNILTVEDLEKKIPWNIVLLFSGAMSIGFCLWKTGAAQWIAVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHH WLAMLVDAHWLVFVLGICFLVMIMTNFIMNVAAIAITLPVALVIAQYLGVNPELILYGAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECH AMAGMPFLLLIGAAPNAMAYESKQFTTGEFFKTGIPASAMLLCILVLMTFTYWPLIGMSA HHHCCCHHEEEECCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIH HCC >Mature Secondary Structure SENIKRIAFILLGVALFLGFYFAPQFSPAIDPSGKAFDLSQEGKAAIGLFLLAGIWWVF CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHH EVTPIGVTSIAIGVVQALFLIRPAKEAFRDFMDPTVMFILGSLLIGLAFTKAGITKRLAY HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH KMLDVVGEDTRKILLGVFVITALLTHIMAHTAVAATMFPILVTILALYGENPDGKPTNFG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KALFIGMAYTAGAGSICTLLGGARNPAAVGFYTEFTGAEVSFLEFSAHLAPFGWLTVFLL HHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHHHHCHHHHHHHHHH WALLLIIYKPEKTKIPGLREKARIEYAKLGPVNKQEIFVGIVVFCALAMLVLQAIIPALK HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PMDRSVPLLLAGLLFFLSNILTVEDLEKKIPWNIVLLFSGAMSIGFCLWKTGAAQWIAVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHH WLAMLVDAHWLVFVLGICFLVMIMTNFIMNVAAIAITLPVALVIAQYLGVNPELILYGAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECH AMAGMPFLLLIGAAPNAMAYESKQFTTGEFFKTGIPASAMLLCILVLMTFTYWPLIGMSA HHHCCCHHEEEECCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIH HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]