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The map label for this gene is ribC [H]

Identifier: 134299800

GI number: 134299800

Start: 2143615

End: 2144550

Strand: Reverse

Name: ribC [H]

Synonym: Dred_1953

Alternate gene names: 134299800

Gene position: 2144550-2143615 (Counterclockwise)

Preceding gene: 134299801

Following gene: 134299799

Centisome position: 59.44

GC content: 41.45

Gene sequence:

>936_bases
TTGCGTGTTTATAAAAGCCTTAAAGGGCTTAAAGATATATATCCTAACATTATTGTAGCATTAGGAAATTTTGATGGGAT
TCATCTCGGGCATCAAAGGCTCATCGGTGAAGCTGTGGCAGTTGCACGTCGTACAAACGGAACAGCAGCGGTATTAACCT
TTGAACCACATCCTCTAATGGTTCTTAAACCAGAAATGGCACCTGCCATGCTGTTAGACCAGGAATCAAAGCAGCGTATC
ATGGCGGAACTAGGTGTGGATATTTTAATACTGTTACCCTTTACCCAGGAACTTGCTCATTTAAGCCCAGAGGAATTTCT
CAAAGAAATTCTTGTTAAGGAAATGAACGTTCGAGGAATTGTTGTTGGATACAACTATTCCTTTGGTTATAAAGGCAGCG
GTACCTCAGAAGATCTTCGCAGTTATGCCCTTGAGTACGGCTATTCACTCAGTGTAATTCCACCTGTTAAGGTAGGAGAA
CAAGTAGTTAGCAGTACTCTCATAAGAAACAAATTAGCAGAAGGAGACGTTATTGCTGCAAAGAGATACCTTGGGTATTA
CCCCTTCACAGAAGGGATTGTGGTGACGGGGGATCGCAGGGGAGGAAACGCCTTGGGTTTTCCTACGGCCAATATTGATT
GTCCTGATGGTATGATGGTACCTGCCAAAGGGGTCTACAGCGTTCATGTAGAATTGGATGGTGAGACATACTTGGGGGTA
GCTAATGTTGGAACAAAGCCTACTTTTCACGGCAACAATCCACGAACCAATATTGAAGTTCATTTATTAGATTTCTGTGG
TGACATCTACGGTAAGAAAATAAAAGTTCAATATATTCGTAAACTAAGGGATGAAAAAAAGTTTAACTCTGTCCACGATC
TGATTAATCAAATTCAGGCTGATGTATTAAGTGCCAGATTTGACCATCCAGAGTAA

Upstream 100 bases:

>100_bases
TGCTTCATAAATACAGAATGATTTTATGGATCTACCGGAATTCTGTGAGGTATTATATTAAATAGGGGCAGAATGTTGCA
GTTGGCAGGGGGTAAGAGAG

Downstream 100 bases:

>100_bases
ATTAGAATAATTAAGAAGAAATCCCCATATATTTATTGTACCTAACGTTTACATCCGGCAGTGGTTGTGCTACAATAAAT
GCGGCAAACGTCCCGATATT

Product: riboflavin biosynthesis protein RibF

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRVYKSLKGLKDIYPNIIVALGNFDGIHLGHQRLIGEAVAVARRTNGTAAVLTFEPHPLMVLKPEMAPAMLLDQESKQRI
MAELGVDILILLPFTQELAHLSPEEFLKEILVKEMNVRGIVVGYNYSFGYKGSGTSEDLRSYALEYGYSLSVIPPVKVGE
QVVSSTLIRNKLAEGDVIAAKRYLGYYPFTEGIVVTGDRRGGNALGFPTANIDCPDGMMVPAKGVYSVHVELDGETYLGV
ANVGTKPTFHGNNPRTNIEVHLLDFCGDIYGKKIKVQYIRKLRDEKKFNSVHDLINQIQADVLSARFDHPE

Sequences:

>Translated_311_residues
MRVYKSLKGLKDIYPNIIVALGNFDGIHLGHQRLIGEAVAVARRTNGTAAVLTFEPHPLMVLKPEMAPAMLLDQESKQRI
MAELGVDILILLPFTQELAHLSPEEFLKEILVKEMNVRGIVVGYNYSFGYKGSGTSEDLRSYALEYGYSLSVIPPVKVGE
QVVSSTLIRNKLAEGDVIAAKRYLGYYPFTEGIVVTGDRRGGNALGFPTANIDCPDGMMVPAKGVYSVHVELDGETYLGV
ANVGTKPTFHGNNPRTNIEVHLLDFCGDIYGKKIKVQYIRKLRDEKKFNSVHDLINQIQADVLSARFDHPE
>Mature_311_residues
MRVYKSLKGLKDIYPNIIVALGNFDGIHLGHQRLIGEAVAVARRTNGTAAVLTFEPHPLMVLKPEMAPAMLLDQESKQRI
MAELGVDILILLPFTQELAHLSPEEFLKEILVKEMNVRGIVVGYNYSFGYKGSGTSEDLRSYALEYGYSLSVIPPVKVGE
QVVSSTLIRNKLAEGDVIAAKRYLGYYPFTEGIVVTGDRRGGNALGFPTANIDCPDGMMVPAKGVYSVHVELDGETYLGV
ANVGTKPTFHGNNPRTNIEVHLLDFCGDIYGKKIKVQYIRKLRDEKKFNSVHDLINQIQADVLSARFDHPE

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=291, Percent_Identity=37.8006872852234, Blast_Score=183, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17541882, Length=127, Percent_Identity=37.7952755905512, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 34435; Mature: 34435

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVYKSLKGLKDIYPNIIVALGNFDGIHLGHQRLIGEAVAVARRTNGTAAVLTFEPHPLM
CCHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEE
VLKPEMAPAMLLDQESKQRIMAELGVDILILLPFTQELAHLSPEEFLKEILVKEMNVRGI
EECCCCCCHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCEE
VVGYNYSFGYKGSGTSEDLRSYALEYGYSLSVIPPVKVGEQVVSSTLIRNKLAEGDVIAA
EEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEH
KRYLGYYPFTEGIVVTGDRRGGNALGFPTANIDCPDGMMVPAKGVYSVHVELDGETYLGV
HHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCEEEEE
ANVGTKPTFHGNNPRTNIEVHLLDFCGDIYGKKIKVQYIRKLRDEKKFNSVHDLINQIQA
ECCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
DVLSARFDHPE
HHHHHCCCCCC
>Mature Secondary Structure
MRVYKSLKGLKDIYPNIIVALGNFDGIHLGHQRLIGEAVAVARRTNGTAAVLTFEPHPLM
CCHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEE
VLKPEMAPAMLLDQESKQRIMAELGVDILILLPFTQELAHLSPEEFLKEILVKEMNVRGI
EECCCCCCHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCCEE
VVGYNYSFGYKGSGTSEDLRSYALEYGYSLSVIPPVKVGEQVVSSTLIRNKLAEGDVIAA
EEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEH
KRYLGYYPFTEGIVVTGDRRGGNALGFPTANIDCPDGMMVPAKGVYSVHVELDGETYLGV
HHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEEEECCCEEEEE
ANVGTKPTFHGNNPRTNIEVHLLDFCGDIYGKKIKVQYIRKLRDEKKFNSVHDLINQIQA
ECCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
DVLSARFDHPE
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9454067; 9108293; 9384377 [H]