| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is spoVFA [H]
Identifier: 134299791
GI number: 134299791
Start: 2134349
End: 2135251
Strand: Reverse
Name: spoVFA [H]
Synonym: Dred_1943
Alternate gene names: 134299791
Gene position: 2135251-2134349 (Counterclockwise)
Preceding gene: 134299792
Following gene: 134299790
Centisome position: 59.18
GC content: 45.29
Gene sequence:
>903_bases ATGCAGCCCGATTTAAAAGGAGTAAAAGTGGCTGTTCTAGGTGGTGATGCCAGGGAGATTGTACTGGTTTCTACTTTATC TCGTCTGGGTGCCTATGTGAGGGTAGTGGGGTTACCTGTTAAAAACGATCCTCCCCATGTCACACTTTACCAAAGCCTAG AAGAAGCGCTGGAGGAAGTTCAAGCAGTCATATTACCGGTACCAGGTATCCTTGAGAGTGGCAATCTCTATTGTGTATAT GAAGAGAAACCACTGGTACTTTCGGAAGCGTTGCTTGTTAAGCTACCTCCCCAGGCTCCAATTTTTGTTGGTTTTGCCCG ACCTAAGTTGAAAGAAATTGTACAAAGAAGCAATGTAAAACTTATTACGGTACTTGATCTGGATGAAGTTGCAATTTTAA ACTCCATTCCCTCAGCGGAGGGGGCTGTTCAGATGGCTATGGAGAACACTGCAATCACCATTCATAACAGTGAATCCTTT GTGTTAGGATTTGGACGTACCGGAGCAAGTATTGCAAGATTACTTCACGGTATGGGGGCAAAGGTCACTGTTGTGGCAAG GTCGGCAACTCATAGGGCCAGGGCATACGAGATGGGTATGAAGTCAATATCCTTTGAGGAATTACCTGATGCAATAACCC AGGCAGAGATTATTTTTAATACTGTTCCCATATTGATTTTAACAAACTGCATCTTAAACAAGACAAGGGAGGATGCAGTG ATAATTGACGTTGCCTCCCCACCCGGTGGGACAGATTTTGAGGCTGCAGCGAGATTAGGTATTAAAGCCCTCTTAGCACC GGGACTTCCCGGTAAAGTGGCACCAAAAACCGCTGGGCAAATTCTTTCCAGGGTAATACCTAATTTGTTGGCCCAAGAGT TGCAACGAAAGAGCGGACAGTAG
Upstream 100 bases:
>100_bases GCATTTTCCGCACTGACTGTAGGCCTTACGTACAAGCACCACCCCTTCCGATCTTTCATATCATGTAGTGTGTCACAGAT GGCAGAGAGGAGGGTGAAAA
Downstream 100 bases:
>100_bases AAAGGCTTACGGAGGTGCGGAATATGCGTTTAAAAGGACTTCGCGTTGGTTTTGCTCTTACAGGATCTCATTGCTGTTTA GATGAAATAATGCCCAAAAT
Product: dipicolinate synthase subunit A
Products: NA
Alternate protein names: Stage V sporulation protein FA [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MQPDLKGVKVAVLGGDAREIVLVSTLSRLGAYVRVVGLPVKNDPPHVTLYQSLEEALEEVQAVILPVPGILESGNLYCVY EEKPLVLSEALLVKLPPQAPIFVGFARPKLKEIVQRSNVKLITVLDLDEVAILNSIPSAEGAVQMAMENTAITIHNSESF VLGFGRTGASIARLLHGMGAKVTVVARSATHRARAYEMGMKSISFEELPDAITQAEIIFNTVPILILTNCILNKTREDAV IIDVASPPGGTDFEAAARLGIKALLAPGLPGKVAPKTAGQILSRVIPNLLAQELQRKSGQ
Sequences:
>Translated_300_residues MQPDLKGVKVAVLGGDAREIVLVSTLSRLGAYVRVVGLPVKNDPPHVTLYQSLEEALEEVQAVILPVPGILESGNLYCVY EEKPLVLSEALLVKLPPQAPIFVGFARPKLKEIVQRSNVKLITVLDLDEVAILNSIPSAEGAVQMAMENTAITIHNSESF VLGFGRTGASIARLLHGMGAKVTVVARSATHRARAYEMGMKSISFEELPDAITQAEIIFNTVPILILTNCILNKTREDAV IIDVASPPGGTDFEAAARLGIKALLAPGLPGKVAPKTAGQILSRVIPNLLAQELQRKSGQ >Mature_300_residues MQPDLKGVKVAVLGGDAREIVLVSTLSRLGAYVRVVGLPVKNDPPHVTLYQSLEEALEEVQAVILPVPGILESGNLYCVY EEKPLVLSEALLVKLPPQAPIFVGFARPKLKEIVQRSNVKLITVLDLDEVAILNSIPSAEGAVQMAMENTAITIHNSESF VLGFGRTGASIARLLHGMGAKVTVVARSATHRARAYEMGMKSISFEELPDAITQAEIIFNTVPILILTNCILNKTREDAV IIDVASPPGGTDFEAAARLGIKALLAPGLPGKVAPKTAGQILSRVIPNLLAQELQRKSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006140 - InterPro: IPR014215 - InterPro: IPR016040 [H]
Pfam domain/function: PF02826 2-Hacid_dh_C [H]
EC number: NA
Molecular weight: Translated: 32044; Mature: 32044
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDLKGVKVAVLGGDAREIVLVSTLSRLGAYVRVVGLPVKNDPPHVTLYQSLEEALEEV CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH QAVILPVPGILESGNLYCVYEEKPLVLSEALLVKLPPQAPIFVGFARPKLKEIVQRSNVK HEEEECCCCEECCCCEEEEECCCCCEEECEEEEECCCCCCEEEEECCHHHHHHHHHCCCE LITVLDLDEVAILNSIPSAEGAVQMAMENTAITIHNSESFVLGFGRTGASIARLLHGMGA EEEEECCCHHHHHHCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCCHHHHHHHHCCCC KVTVVARSATHRARAYEMGMKSISFEELPDAITQAEIIFNTVPILILTNCILNKTREDAV EEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IIDVASPPGGTDFEAAARLGIKALLAPGLPGKVAPKTAGQILSRVIPNLLAQELQRKSGQ EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQPDLKGVKVAVLGGDAREIVLVSTLSRLGAYVRVVGLPVKNDPPHVTLYQSLEEALEEV CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH QAVILPVPGILESGNLYCVYEEKPLVLSEALLVKLPPQAPIFVGFARPKLKEIVQRSNVK HEEEECCCCEECCCCEEEEECCCCCEEECEEEEECCCCCCEEEEECCHHHHHHHHHCCCE LITVLDLDEVAILNSIPSAEGAVQMAMENTAITIHNSESFVLGFGRTGASIARLLHGMGA EEEEECCCHHHHHHCCCCCCCCEEEEECCEEEEEECCCEEEEEECCCCHHHHHHHHCCCC KVTVVARSATHRARAYEMGMKSISFEELPDAITQAEIIFNTVPILILTNCILNKTREDAV EEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IIDVASPPGGTDFEAAARLGIKALLAPGLPGKVAPKTAGQILSRVIPNLLAQELQRKSGQ EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8098035; 8345520; 9384377 [H]