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The map label for this gene is 134299769

Identifier: 134299769

GI number: 134299769

Start: 2107082

End: 2108620

Strand: Reverse

Name: 134299769

Synonym: Dred_1919

Alternate gene names: NA

Gene position: 2108620-2107082 (Counterclockwise)

Preceding gene: 134299770

Following gene: 134299768

Centisome position: 58.44

GC content: 42.24

Gene sequence:

>1539_bases
GTGGAGTTTCAAATAATTTTAGTGGTTATTATTTCCGCTTTGGTTGGACTTGTAATTGGTTTTTTTATTCGAAAGAATAT
TGCCGAGGGTAAAATAACATCGGCTGAAGCCCAGGCTAAGAGAATTCTTGAAGAGGCTGAGAAGAATGCTGAGGGCAAAA
AACGGGAAGCCATTGTTATGGCAAAGGAAGAAGTTCTAAAACTACGGAACGAAATGGAAAGAGAAATAAGGGACCGTAGA
AATGAACTGCAACGGTTAGAAAGAAGGCTTCTGCAAAAAGAGGAGACTCTAGACAGGAAAATGGATTCCATGGAAAAGAA
AGAGGAATCCTTAAGTCGCAAAGAAGCTGACATTGAAAATACCAAGGCTGAGCTTACTAATGTTTTAAATCGGCAGTTAG
CTGAGTTGGAGCGAGTATCGGGGCTTTCATCGGAAGAGGCTCGCCAGATACTGTTAAATGATGTGGAGAAAGAGCTTCAA
CACGATATGGCTGTGATGATTAAAGACTTTGAAAACCGTGCTAAAGAAGAAGCGGATAAGAAGGCACGGGACATTATTTC
GTCAGCTATTCAAAGATGTGCAGCAGACCATGTTGCAGAGGCCACTGTTGCTGTTATACCATTGCCAAATGACGAAATGA
AGGGTCGTATAATCGGTAGGGAAGGTCGTAATATTCGGGCCTTTGAAACCCTAACAGGTATTGATTTAATTATTGATGAT
ACGCCTGAGGCAGTTATCCTTTCAGGTTTTGATCCCATTCGTCGAGAAGTGGCAAGATTGGCACTTGAAAGGCTAATCTC
CGATGGACGTATACACCCTGCCAGAATTGAAGAGATGGTTGAGAAGGCTCAGAAAGATGTAGAAGTACAGATACGTGAAG
CAGGTGAACAGGCTACCTTTGAAACAGGTGTCCATGGCCTTCACCCTGAGCTGGTAAAACTACTTGGACGTCTGAAGTTT
CGTACCAGTTATGGGCAGAATGTCTTAAAACATTCCATTGAGGTCTGTCACCTAGCAGGACTCATGGCAGCAGAACTGGG
TATAGATGTTAAACTTGCGAAACGTGCTGGGTTATTGCACGACATTGGGAAAGCTGTTGACCATGAGGTGGAAGGACCTC
ACGTAGCTATCGGTGTAAACCTTTGTCAAAAATATAAGGAAAGTCCAGAAGTTATTCATGCCATCGCAGCACATCACGGA
GATGAAGAGCCAAGAACCATAGAAGCTGTCTTGGTACAAGCTGCTGATGCAATATCAGCCGCACGCCCTGGTGCTAGAAG
AGAGACTTTGGAATCCTATATTAAGCGATTGCAGAAATTGGAAGAAATTGCAGGCACCTTTGAAGGTGTTGAAAAATCCT
TTGCTATTCAGGCAGGAAGAGAAATCCGAATTATGGTTAAACCAGATAAAATAGATGATCTGGCTGCTATTCGCCTAGTA
AGGGATATTGCTAAAAAGATTGAAAATGAACTGGATTATCCCGGTCAAATTAAAGTTATTATTATTCGGGAAACCAGGTA
TGTTGAATATGCTAAATAA

Upstream 100 bases:

>100_bases
ACAAACCAGATATCTGTTTATTTTCGACCGAGTATTACTCGGTTTTTTATTTTATGTTCGATTTAAAAGGGCAGTATTCA
TAAGACAGGAGGTGAAAACA

Downstream 100 bases:

>100_bases
TAAAACGACCCAGAGGGTCGTTTTATTATTTGGAATTAATCACCAAATATACCACAAAAATAATTTATTAAAAATATAAT
TAGCGGCAGGAAAGTATATT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MEFQIILVVIISALVGLVIGFFIRKNIAEGKITSAEAQAKRILEEAEKNAEGKKREAIVMAKEEVLKLRNEMEREIRDRR
NELQRLERRLLQKEETLDRKMDSMEKKEESLSRKEADIENTKAELTNVLNRQLAELERVSGLSSEEARQILLNDVEKELQ
HDMAVMIKDFENRAKEEADKKARDIISSAIQRCAADHVAEATVAVIPLPNDEMKGRIIGREGRNIRAFETLTGIDLIIDD
TPEAVILSGFDPIRREVARLALERLISDGRIHPARIEEMVEKAQKDVEVQIREAGEQATFETGVHGLHPELVKLLGRLKF
RTSYGQNVLKHSIEVCHLAGLMAAELGIDVKLAKRAGLLHDIGKAVDHEVEGPHVAIGVNLCQKYKESPEVIHAIAAHHG
DEEPRTIEAVLVQAADAISAARPGARRETLESYIKRLQKLEEIAGTFEGVEKSFAIQAGREIRIMVKPDKIDDLAAIRLV
RDIAKKIENELDYPGQIKVIIIRETRYVEYAK

Sequences:

>Translated_512_residues
MEFQIILVVIISALVGLVIGFFIRKNIAEGKITSAEAQAKRILEEAEKNAEGKKREAIVMAKEEVLKLRNEMEREIRDRR
NELQRLERRLLQKEETLDRKMDSMEKKEESLSRKEADIENTKAELTNVLNRQLAELERVSGLSSEEARQILLNDVEKELQ
HDMAVMIKDFENRAKEEADKKARDIISSAIQRCAADHVAEATVAVIPLPNDEMKGRIIGREGRNIRAFETLTGIDLIIDD
TPEAVILSGFDPIRREVARLALERLISDGRIHPARIEEMVEKAQKDVEVQIREAGEQATFETGVHGLHPELVKLLGRLKF
RTSYGQNVLKHSIEVCHLAGLMAAELGIDVKLAKRAGLLHDIGKAVDHEVEGPHVAIGVNLCQKYKESPEVIHAIAAHHG
DEEPRTIEAVLVQAADAISAARPGARRETLESYIKRLQKLEEIAGTFEGVEKSFAIQAGREIRIMVKPDKIDDLAAIRLV
RDIAKKIENELDYPGQIKVIIIRETRYVEYAK
>Mature_512_residues
MEFQIILVVIISALVGLVIGFFIRKNIAEGKITSAEAQAKRILEEAEKNAEGKKREAIVMAKEEVLKLRNEMEREIRDRR
NELQRLERRLLQKEETLDRKMDSMEKKEESLSRKEADIENTKAELTNVLNRQLAELERVSGLSSEEARQILLNDVEKELQ
HDMAVMIKDFENRAKEEADKKARDIISSAIQRCAADHVAEATVAVIPLPNDEMKGRIIGREGRNIRAFETLTGIDLIIDD
TPEAVILSGFDPIRREVARLALERLISDGRIHPARIEEMVEKAQKDVEVQIREAGEQATFETGVHGLHPELVKLLGRLKF
RTSYGQNVLKHSIEVCHLAGLMAAELGIDVKLAKRAGLLHDIGKAVDHEVEGPHVAIGVNLCQKYKESPEVIHAIAAHHG
DEEPRTIEAVLVQAADAISAARPGARRETLESYIKRLQKLEEIAGTFEGVEKSFAIQAGREIRIMVKPDKIDDLAAIRLV
RDIAKKIENELDYPGQIKVIIIRETRYVEYAK

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CNPD_DESRM (A4J5T7)

Other databases:

- EMBL:   CP000612
- RefSeq:   YP_001113265.1
- ProteinModelPortal:   A4J5T7
- SMR:   A4J5T7
- STRING:   A4J5T7
- GeneID:   4958017
- GenomeReviews:   CP000612_GR
- KEGG:   drm:Dred_1919
- eggNOG:   COG1418
- HOGENOM:   HBG734610
- OMA:   HPGRIEE
- ProtClustDB:   PRK12704
- BioCyc:   DRED349161:DRED_1919-MONOMER
- HAMAP:   MF_00335
- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675
- SMART:   SM00471
- SMART:   SM00322
- TIGRFAMs:   TIGR00277
- TIGRFAMs:   TIGR03319

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1

EC number: =3.1.4.16

Molecular weight: Translated: 57725; Mature: 57725

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf59ecd4)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFQIILVVIISALVGLVIGFFIRKNIAEGKITSAEAQAKRILEEAEKNAEGKKREAIVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
AKEEVLKLRNEMEREIRDRRNELQRLERRLLQKEETLDRKMDSMEKKEESLSRKEADIEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKAELTNVLNRQLAELERVSGLSSEEARQILLNDVEKELQHDMAVMIKDFENRAKEEADK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KARDIISSAIQRCAADHVAEATVAVIPLPNDEMKGRIIGREGRNIRAFETLTGIDLIIDD
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEECCCCCCEEHHHHHCCCEEEECC
TPEAVILSGFDPIRREVARLALERLISDGRIHPARIEEMVEKAQKDVEVQIREAGEQATF
CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ETGVHGLHPELVKLLGRLKFRTSYGQNVLKHSIEVCHLAGLMAAELGIDVKLAKRAGLLH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHH
DIGKAVDHEVEGPHVAIGVNLCQKYKESPEVIHAIAAHHGDEEPRTIEAVLVQAADAISA
HHHHHHCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ARPGARRETLESYIKRLQKLEEIAGTFEGVEKSFAIQAGREIRIMVKPDKIDDLAAIRLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
RDIAKKIENELDYPGQIKVIIIRETRYVEYAK
HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH
>Mature Secondary Structure
MEFQIILVVIISALVGLVIGFFIRKNIAEGKITSAEAQAKRILEEAEKNAEGKKREAIVM
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
AKEEVLKLRNEMEREIRDRRNELQRLERRLLQKEETLDRKMDSMEKKEESLSRKEADIEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKAELTNVLNRQLAELERVSGLSSEEARQILLNDVEKELQHDMAVMIKDFENRAKEEADK
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KARDIISSAIQRCAADHVAEATVAVIPLPNDEMKGRIIGREGRNIRAFETLTGIDLIIDD
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEECCCCCCEEHHHHHCCCEEEECC
TPEAVILSGFDPIRREVARLALERLISDGRIHPARIEEMVEKAQKDVEVQIREAGEQATF
CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ETGVHGLHPELVKLLGRLKFRTSYGQNVLKHSIEVCHLAGLMAAELGIDVKLAKRAGLLH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHH
DIGKAVDHEVEGPHVAIGVNLCQKYKESPEVIHAIAAHHGDEEPRTIEAVLVQAADAISA
HHHHHHCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
ARPGARRETLESYIKRLQKLEEIAGTFEGVEKSFAIQAGREIRIMVKPDKIDDLAAIRLV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH
RDIAKKIENELDYPGQIKVIIIRETRYVEYAK
HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA