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The map label for this gene is ymdB [H]

Identifier: 134299767

GI number: 134299767

Start: 2105617

End: 2106396

Strand: Reverse

Name: ymdB [H]

Synonym: Dred_1917

Alternate gene names: 134299767

Gene position: 2106396-2105617 (Counterclockwise)

Preceding gene: 134299768

Following gene: 134299766

Centisome position: 58.38

GC content: 38.59

Gene sequence:

>780_bases
TTGCGTGTTTTAATGATAGGAGATATCGTAGGCCGACCAGGTAGAAGGGCAATTTTAGATAACCTACAAGCACTGCGTAA
AGAACTAAACATTGATTTTGTTATTGCCAATGGTGAAAATGCTGCGGGGGGCCACGGAATTACAAAAGAAATTGCAAAGC
AGCTTTTTGCTACTGGGGTAGACGTTTTTACCATGGGTAACCATGTATGGAATAAAAAAGAAATTATAGCCTATATAGAG
AAGGAAAGAAAAATTATTCGCCCTGCAAATTACCCTCCTGGTACACCAGGAGCAGGGTATAATATTTATGAAACCAATTC
GGGTCATAGTATTGCAGTGATCAATATCTCTGGTAGAATTTTTATGCAGGAATTGGATTGCCCTTTTAGGAAAATCGATA
AGATACTAGAAGAAATTAATAGTAAAACAAACCTTATTTTTGTAGACTTTCATGCAGAAGCAACATCAGAAAAAGTAGCT
ATGGGCTGGTATTTAGATGGCAGGGTTACTGCTCTTTGCGGTACCCATACCCATGTACAAACAGCAGATGAGCGGATATT
ACCTAAGGGAAGTGCTTATATCACGGATATTGGAATGACTGGCCCTAGGGATTCGGTAATTGGTGTCAGTACAAACCTTG
TGATAGAAAAATTTATGACTCAAATGCCACGGAGGTTTGAAGTGGCAGAAACTGATTATCAATTAAATGCAGTGGTAATA
GATGTCAACCCTGATAATGGGATTGCCACCAACATTGAAAGGATTTTTCATTTGGAATAG

Upstream 100 bases:

>100_bases
TAGAAAGTATAAAAAATAAGTCTGAAAATAAACGTTTATATGCTTTCAGAGATGAAGGACGAGTCCTTGTTTTTAACAAA
TAGGGAGGCATTCTGTAAAA

Downstream 100 bases:

>100_bases
CTACATATAATACTCAATCTAAAAATTTTAAATTTTTATACAATAGAAGGAATTTTTAGGATTCTGCAGAATAAAATTAA
TACAGGAATTAGAGCAATTA

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MRVLMIGDIVGRPGRRAILDNLQALRKELNIDFVIANGENAAGGHGITKEIAKQLFATGVDVFTMGNHVWNKKEIIAYIE
KERKIIRPANYPPGTPGAGYNIYETNSGHSIAVINISGRIFMQELDCPFRKIDKILEEINSKTNLIFVDFHAEATSEKVA
MGWYLDGRVTALCGTHTHVQTADERILPKGSAYITDIGMTGPRDSVIGVSTNLVIEKFMTQMPRRFEVAETDYQLNAVVI
DVNPDNGIATNIERIFHLE

Sequences:

>Translated_259_residues
MRVLMIGDIVGRPGRRAILDNLQALRKELNIDFVIANGENAAGGHGITKEIAKQLFATGVDVFTMGNHVWNKKEIIAYIE
KERKIIRPANYPPGTPGAGYNIYETNSGHSIAVINISGRIFMQELDCPFRKIDKILEEINSKTNLIFVDFHAEATSEKVA
MGWYLDGRVTALCGTHTHVQTADERILPKGSAYITDIGMTGPRDSVIGVSTNLVIEKFMTQMPRRFEVAETDYQLNAVVI
DVNPDNGIATNIERIFHLE
>Mature_259_residues
MRVLMIGDIVGRPGRRAILDNLQALRKELNIDFVIANGENAAGGHGITKEIAKQLFATGVDVFTMGNHVWNKKEIIAYIE
KERKIIRPANYPPGTPGAGYNIYETNSGHSIAVINISGRIFMQELDCPFRKIDKILEEINSKTNLIFVDFHAEATSEKVA
MGWYLDGRVTALCGTHTHVQTADERILPKGSAYITDIGMTGPRDSVIGVSTNLVIEKFMTQMPRRFEVAETDYQLNAVVI
DVNPDNGIATNIERIFHLE

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28813; Mature: 28813

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLMIGDIVGRPGRRAILDNLQALRKELNIDFVIANGENAAGGHGITKEIAKQLFATGV
CEEEEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
DVFTMGNHVWNKKEIIAYIEKERKIIRPANYPPGTPGAGYNIYETNSGHSIAVINISGRI
EEEECCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCEE
FMQELDCPFRKIDKILEEINSKTNLIFVDFHAEATSEKVAMGWYLDGRVTALCGTHTHVQ
EEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEECCEEEEEECCCCEEE
TADERILPKGSAYITDIGMTGPRDSVIGVSTNLVIEKFMTQMPRRFEVAETDYQLNAVVI
CCCHHCCCCCCEEEEECCCCCCCCCEEECHHHHHHHHHHHHCCCEEEEECCCEEEEEEEE
DVNPDNGIATNIERIFHLE
EECCCCCCCCCCEEEEECC
>Mature Secondary Structure
MRVLMIGDIVGRPGRRAILDNLQALRKELNIDFVIANGENAAGGHGITKEIAKQLFATGV
CEEEEEEHHHCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
DVFTMGNHVWNKKEIIAYIEKERKIIRPANYPPGTPGAGYNIYETNSGHSIAVINISGRI
EEEECCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEEEECCEE
FMQELDCPFRKIDKILEEINSKTNLIFVDFHAEATSEKVAMGWYLDGRVTALCGTHTHVQ
EEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEECCEEEEEECCCCEEE
TADERILPKGSAYITDIGMTGPRDSVIGVSTNLVIEKFMTQMPRRFEVAETDYQLNAVVI
CCCHHCCCCCCEEEEECCCCCCCCCEEECHHHHHHHHHHHHCCCEEEEECCCEEEEEEEE
DVNPDNGIATNIERIFHLE
EECCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]