| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is yeiH [C]
Identifier: 134299714
GI number: 134299714
Start: 2045633
End: 2046706
Strand: Reverse
Name: yeiH [C]
Synonym: Dred_1861
Alternate gene names: 134299714
Gene position: 2046706-2045633 (Counterclockwise)
Preceding gene: 134299715
Following gene: 134299713
Centisome position: 56.73
GC content: 41.15
Gene sequence:
>1074_bases TTGGCCCAAACAGAAATTAGCCAAGCACAAAGTCAGAGCGTTGGTGCTCAAATAGCAAAGGCAATCCCGGGTTTAATTCT GGTAGCAATACTTGCCATTGTTGCCATGTGGGGAGAAGGATACCTTAAGACAAACCACAAAGTTTTTTACGAGGTGACCC TTTTAAACCACATCTTATTAGCCATTCTTTTCGGTATGATCATTCGTAATACTATTGGAGTCCCTTCGGTATTGGAGCCG GGTCTAAAATACTCCACCATTTTAACGAAAACAGGTATTGTTATTATGGGTACCAAATACACCTTAGCTTCATTGGTTAA GGTAGGTTCAGTAAGTATGGCCTTTATTACTATTACATTATTTGCAACAGTTATACTGACCTTTTGGCTACGTAAGCGTT TTGAAATGACAGATTCTTTAGCAGGTTGCTTGGCGGCTGGCTTTTCAATCTGCGGTGTGTCCGCCACTGTAGCCACTGGC CCGGCTGTAAAGGCGAAGGGTCAAGAAATGGCTTACACCATTGCCACCATCTTAATCTTTGGTTTGATAGCTTTATTCAC CTTTCCTGCTTTGGGTAAAATGATGGGATTAACCGAAAATCAGTTTGGAGCTTGGGTGGGTGTAGGTATCGTTAACTCTG CACAGGTATTGGCAGCTGGCATGGCCTATGGTCATGATGCAGGTTTGATGGCAGGTATCTATAATATGGGGCGTGTTGTA CTGTTGCCCTTTGTTGTACTCTATGTTGTAATGCAGGTTCTGAAAAATGACAGCAAAGCTGCCAACAACATTAACAAAAC ACAGTTTGTTTTAGACAAATTCCCCATGTTTATCTTAGCCTTTCTAATTGCTGTACTTGCTAACACAGCAGGTTTCTTTA GTAAAGAAGAAATAAAAATTGCTAAAGAGATGATGGATTGGTGCTTTGCTTTAGGTTTTGCCAGCATTGGTTTGACCACT AAATTCTCAGATATGAAAGCAGCTGGTAAGGATGGCATTATCTTAGGATTTATCGTTGGTGCAGCTAAGGCTGTCTTTGC ACTACTGGTCGTAAAATACTTTTTACCCTTTTAG
Upstream 100 bases:
>100_bases TCGGTGTATTAACCATTGAGTTTATACGAAAGGAGGCGCTGTAAAGCCATTTAGTGTGGATAATCAGTAATAAACAATAT TTAAATGGAGGTGCTTTTAC
Downstream 100 bases:
>100_bases TTAACTCATAAAGAAAAAAGCGGAGGCGTTACAGTATGTCTGAAAACAATAGTTCTGCAATGGAAGCACAAAGAGCAGCT GACATCAAAGTTAGAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MAQTEISQAQSQSVGAQIAKAIPGLILVAILAIVAMWGEGYLKTNHKVFYEVTLLNHILLAILFGMIIRNTIGVPSVLEP GLKYSTILTKTGIVIMGTKYTLASLVKVGSVSMAFITITLFATVILTFWLRKRFEMTDSLAGCLAAGFSICGVSATVATG PAVKAKGQEMAYTIATILIFGLIALFTFPALGKMMGLTENQFGAWVGVGIVNSAQVLAAGMAYGHDAGLMAGIYNMGRVV LLPFVVLYVVMQVLKNDSKAANNINKTQFVLDKFPMFILAFLIAVLANTAGFFSKEEIKIAKEMMDWCFALGFASIGLTT KFSDMKAAGKDGIILGFIVGAAKAVFALLVVKYFLPF
Sequences:
>Translated_357_residues MAQTEISQAQSQSVGAQIAKAIPGLILVAILAIVAMWGEGYLKTNHKVFYEVTLLNHILLAILFGMIIRNTIGVPSVLEP GLKYSTILTKTGIVIMGTKYTLASLVKVGSVSMAFITITLFATVILTFWLRKRFEMTDSLAGCLAAGFSICGVSATVATG PAVKAKGQEMAYTIATILIFGLIALFTFPALGKMMGLTENQFGAWVGVGIVNSAQVLAAGMAYGHDAGLMAGIYNMGRVV LLPFVVLYVVMQVLKNDSKAANNINKTQFVLDKFPMFILAFLIAVLANTAGFFSKEEIKIAKEMMDWCFALGFASIGLTT KFSDMKAAGKDGIILGFIVGAAKAVFALLVVKYFLPF >Mature_356_residues AQTEISQAQSQSVGAQIAKAIPGLILVAILAIVAMWGEGYLKTNHKVFYEVTLLNHILLAILFGMIIRNTIGVPSVLEPG LKYSTILTKTGIVIMGTKYTLASLVKVGSVSMAFITITLFATVILTFWLRKRFEMTDSLAGCLAAGFSICGVSATVATGP AVKAKGQEMAYTIATILIFGLIALFTFPALGKMMGLTENQFGAWVGVGIVNSAQVLAAGMAYGHDAGLMAGIYNMGRVVL LPFVVLYVVMQVLKNDSKAANNINKTQFVLDKFPMFILAFLIAVLANTAGFFSKEEIKIAKEMMDWCFALGFASIGLTTK FSDMKAAGKDGIILGFIVGAAKAVFALLVVKYFLPF
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=338, Percent_Identity=30.1775147928994, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 38179; Mature: 38048
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTEISQAQSQSVGAQIAKAIPGLILVAILAIVAMWGEGYLKTNHKVFYEVTLLNHILL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEHHHHHHHHHH AILFGMIIRNTIGVPSVLEPGLKYSTILTKTGIVIMGTKYTLASLVKVGSVSMAFITITL HHHHHHHHHHHCCCCHHHCCCCCHHHHHHHCCEEEEECHHHHHHHHHHCCHHHHHHHHHH FATVILTFWLRKRFEMTDSLAGCLAAGFSICGVSATVATGPAVKAKGQEMAYTIATILIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHH GLIALFTFPALGKMMGLTENQFGAWVGVGIVNSAQVLAAGMAYGHDAGLMAGIYNMGRVV HHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCHHHHHHHHHHCCCCHHHHHHHHHCCHHH LLPFVVLYVVMQVLKNDSKAANNINKTQFVLDKFPMFILAFLIAVLANTAGFFSKEEIKI HHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AKEMMDWCFALGFASIGLTTKFSDMKAAGKDGIILGFIVGAAKAVFALLVVKYFLPF HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AQTEISQAQSQSVGAQIAKAIPGLILVAILAIVAMWGEGYLKTNHKVFYEVTLLNHILL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEHHHHHHHHHH AILFGMIIRNTIGVPSVLEPGLKYSTILTKTGIVIMGTKYTLASLVKVGSVSMAFITITL HHHHHHHHHHHCCCCHHHCCCCCHHHHHHHCCEEEEECHHHHHHHHHHCCHHHHHHHHHH FATVILTFWLRKRFEMTDSLAGCLAAGFSICGVSATVATGPAVKAKGQEMAYTIATILIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHH GLIALFTFPALGKMMGLTENQFGAWVGVGIVNSAQVLAAGMAYGHDAGLMAGIYNMGRVV HHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHCHHHHHHHHHHCCCCHHHHHHHHHCCHHH LLPFVVLYVVMQVLKNDSKAANNINKTQFVLDKFPMFILAFLIAVLANTAGFFSKEEIKI HHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AKEMMDWCFALGFASIGLTTKFSDMKAAGKDGIILGFIVGAAKAVFALLVVKYFLPF HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA