| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299681
Identifier: 134299681
GI number: 134299681
Start: 2007189
End: 2007920
Strand: Reverse
Name: 134299681
Synonym: Dred_1827
Alternate gene names: NA
Gene position: 2007920-2007189 (Counterclockwise)
Preceding gene: 134299682
Following gene: 134299678
Centisome position: 55.65
GC content: 35.79
Gene sequence:
>732_bases TTGAGTGAACATAAATATACTTCCATTGATGAACTAATTAAAAAATCTCTTAAGGAACGAGCCCAAAAAGAAACTGACGT GGATATGGATTTAGCCTGGGAAAAGTTTAACAATAAGTATAACTCTAAGCCTAAATTCACCTCTAAATGGACAGGTATAG CTTGTTCATTAGTTTTTCTTCTGGTAGCTGGACTTTGTTTCCTGCCAAAAGAAGGAACCGCATTAAATTTAAAGTTTTTA GAGACTATCAAATCTTTTGTTGCCGGCAAAGTACAGACTGCCCAGATATCCTTTAGTACACAGGAAAAAGAAAAAGACTT GGAGAACTCTCTGAAACCAGAGGTTGCCCAAGCCTTAAAAGAAGTACCCTATGAAGTTTTGCTACCAGCAGACCTTACTG GCCAGTATAATCTTGAAAAAGCCATGACTCAAAAGGTCGGGGATTCTACTAAAGTTATGTTATTTTTAAAAACCACAAAT TCTGAGCTGGTAAATATCAGCGAGATTAATATAATTGGTGACTTTAATCAGGCAACATCCTACGATACAGAGGATGCAGT ATTAGAAAAAGTTAATGTCAAGGGACAGAATGCAAATTTATTAACTTTTAAGGATGGTAAAAAACAGCTATGCTGGGTTG ACAGAGATGTTTTTGTTACCATAACAGGCCCATTAAACCAAGAAAACCTATTTATTCTGGCCACTTCTTTAAGAAGGGTT AATCTACAGTAA
Upstream 100 bases:
>100_bases GGAACGGTTAAAACACTATTATATAGAGCTAGGATTCTTATCAAAAACCATTTAGTTAAAGAAGGGTACGTAATAGGTAC CTCGGAAGGTGGGTTGAAGG
Downstream 100 bases:
>100_bases AGGAACTGGTGTAAGAAGAATTAGTTTCAGTTAAACCGCCGTTGCTTGCTATGTGTAAAGATCTTACCCTATATGTTGTA CCAGGTATTCCTATATAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSEHKYTSIDELIKKSLKERAQKETDVDMDLAWEKFNNKYNSKPKFTSKWTGIACSLVFLLVAGLCFLPKEGTALNLKFL ETIKSFVAGKVQTAQISFSTQEKEKDLENSLKPEVAQALKEVPYEVLLPADLTGQYNLEKAMTQKVGDSTKVMLFLKTTN SELVNISEINIIGDFNQATSYDTEDAVLEKVNVKGQNANLLTFKDGKKQLCWVDRDVFVTITGPLNQENLFILATSLRRV NLQ
Sequences:
>Translated_243_residues MSEHKYTSIDELIKKSLKERAQKETDVDMDLAWEKFNNKYNSKPKFTSKWTGIACSLVFLLVAGLCFLPKEGTALNLKFL ETIKSFVAGKVQTAQISFSTQEKEKDLENSLKPEVAQALKEVPYEVLLPADLTGQYNLEKAMTQKVGDSTKVMLFLKTTN SELVNISEINIIGDFNQATSYDTEDAVLEKVNVKGQNANLLTFKDGKKQLCWVDRDVFVTITGPLNQENLFILATSLRRV NLQ >Mature_242_residues SEHKYTSIDELIKKSLKERAQKETDVDMDLAWEKFNNKYNSKPKFTSKWTGIACSLVFLLVAGLCFLPKEGTALNLKFLE TIKSFVAGKVQTAQISFSTQEKEKDLENSLKPEVAQALKEVPYEVLLPADLTGQYNLEKAMTQKVGDSTKVMLFLKTTNS ELVNISEINIIGDFNQATSYDTEDAVLEKVNVKGQNANLLTFKDGKKQLCWVDRDVFVTITGPLNQENLFILATSLRRVN LQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27399; Mature: 27268
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHKYTSIDELIKKSLKERAQKETDVDMDLAWEKFNNKYNSKPKFTSKWTGIACSLVFL CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH LVAGLCFLPKEGTALNLKFLETIKSFVAGKVQTAQISFSTQEKEKDLENSLKPEVAQALK HHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHH EVPYEVLLPADLTGQYNLEKAMTQKVGDSTKVMLFLKTTNSELVNISEINIIGDFNQATS HCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCCC YDTEDAVLEKVNVKGQNANLLTFKDGKKQLCWVDRDVFVTITGPLNQENLFILATSLRRV CCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCCEEEEEEEEECC NLQ CCC >Mature Secondary Structure SEHKYTSIDELIKKSLKERAQKETDVDMDLAWEKFNNKYNSKPKFTSKWTGIACSLVFL CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH LVAGLCFLPKEGTALNLKFLETIKSFVAGKVQTAQISFSTQEKEKDLENSLKPEVAQALK HHHHHHCCCCCCCEEEHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCHHHHHHHH EVPYEVLLPADLTGQYNLEKAMTQKVGDSTKVMLFLKTTNSELVNISEINIIGDFNQATS HCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEEECCCCCCC YDTEDAVLEKVNVKGQNANLLTFKDGKKQLCWVDRDVFVTITGPLNQENLFILATSLRRV CCCHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCEEEEEEECCCCCCCEEEEEEEEECC NLQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA