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The map label for this gene is ydeD [C]

Identifier: 134299383

GI number: 134299383

Start: 1652842

End: 1653780

Strand: Reverse

Name: ydeD [C]

Synonym: Dred_1524

Alternate gene names: 134299383

Gene position: 1653780-1652842 (Counterclockwise)

Preceding gene: 134299399

Following gene: 134299379

Centisome position: 45.84

GC content: 40.15

Gene sequence:

>939_bases
ATGGGTCGTTATATTCATCTTTTGTTACTTACGGTATCCTTTTTCTGGGGAACCTCCTTTGCAGCAGCCAAAATAGGCTT
GCAGGAACTGCACCCACTGAACCTTGTAATCTTGCGTTTCACCATTGCTTCTGTTATTTTCTACGTACTTTTACAAATAC
GCAAGGAACGGGCAATAGAAGTGAAAGACATACCCACCTTTATCATTCTAGGTTTTATGGGGATAACATCATACTTTTAT
ATCCAATTCACTGGGTTACAATATACAAATACAATCCATTCGGCTTTAATTATTGCCACCAGTCCAATCATGGTGGCAAT
AATTGGTGCAGCACTGAAAATCGAAAAAATAAGCAGGGCAATGTCCTGTGGCATAGCACTGTCCTTTATTGGTGTATCCT
TAGTCATTTCCGAGGGAAATTGGGCAGGCATATTTCAGTCCACAACCATAAAAGGGGATTTAATGTTATTATCCAATGCA
ATTGTTTGGGCTGGGTTTACTCTGTACGGAAAAAAGATTTTACTTAAATACAGCCCCTTCGTGGCCATGGCCTATATTCA
TATCTTCGGGACACTCCTTCTGCTACCCTTGCTGGCAGTTCCCGATCTATTAGGGACCCATTCGTTAATGAAACAGCTTG
CAGAATTATCCTGGCCAACCGTGTCAGCCGCTCTATACCTTGCACTATTTTGCTCGGTTTATGCATACTTTGTATGGTAT
GCAGGTGTTGAGAAAATTGGTGCCATTCGCACATCTGTTTTTGCATATTTTAATCCTCTCTTTGCCACTTTGACAGGTGT
GCTGTTATTGAACGAAAAGATATCTTTTATCACAATCTTTGGCGGATGTATGGTTATGGCAGGTGTTTATATAACCAATG
AGTTTAAACCAAAGACCGCTGCAAGGGATAATAAAAAAGGACTTAATATATCGGATTAA

Upstream 100 bases:

>100_bases
TTGTCTATGGTAATAAAACTGTTGTAGAATTAACTATCTGTATTGTGGCGTTCACAGCCCAATAAACTAAAATGTATTAC
AACCAATGGAGATGTCTGAA

Downstream 100 bases:

>100_bases
GTCCCTTAATTTTCCTATTACATTATTAATCAACATATACATACCAGGCCTGTTTTCTGGTGTATAAAAAGCATTAGATC
AAAATTGCTTGACAACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MGRYIHLLLLTVSFFWGTSFAAAKIGLQELHPLNLVILRFTIASVIFYVLLQIRKERAIEVKDIPTFIILGFMGITSYFY
IQFTGLQYTNTIHSALIIATSPIMVAIIGAALKIEKISRAMSCGIALSFIGVSLVISEGNWAGIFQSTTIKGDLMLLSNA
IVWAGFTLYGKKILLKYSPFVAMAYIHIFGTLLLLPLLAVPDLLGTHSLMKQLAELSWPTVSAALYLALFCSVYAYFVWY
AGVEKIGAIRTSVFAYFNPLFATLTGVLLLNEKISFITIFGGCMVMAGVYITNEFKPKTAARDNKKGLNISD

Sequences:

>Translated_312_residues
MGRYIHLLLLTVSFFWGTSFAAAKIGLQELHPLNLVILRFTIASVIFYVLLQIRKERAIEVKDIPTFIILGFMGITSYFY
IQFTGLQYTNTIHSALIIATSPIMVAIIGAALKIEKISRAMSCGIALSFIGVSLVISEGNWAGIFQSTTIKGDLMLLSNA
IVWAGFTLYGKKILLKYSPFVAMAYIHIFGTLLLLPLLAVPDLLGTHSLMKQLAELSWPTVSAALYLALFCSVYAYFVWY
AGVEKIGAIRTSVFAYFNPLFATLTGVLLLNEKISFITIFGGCMVMAGVYITNEFKPKTAARDNKKGLNISD
>Mature_311_residues
GRYIHLLLLTVSFFWGTSFAAAKIGLQELHPLNLVILRFTIASVIFYVLLQIRKERAIEVKDIPTFIILGFMGITSYFYI
QFTGLQYTNTIHSALIIATSPIMVAIIGAALKIEKISRAMSCGIALSFIGVSLVISEGNWAGIFQSTTIKGDLMLLSNAI
VWAGFTLYGKKILLKYSPFVAMAYIHIFGTLLLLPLLAVPDLLGTHSLMKQLAELSWPTVSAALYLALFCSVYAYFVWYA
GVEKIGAIRTSVFAYFNPLFATLTGVLLLNEKISFITIFGGCMVMAGVYITNEFKPKTAARDNKKGLNISD

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87081929, Length=284, Percent_Identity=23.5915492957746, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34419; Mature: 34287

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRYIHLLLLTVSFFWGTSFAAAKIGLQELHPLNLVILRFTIASVIFYVLLQIRKERAIE
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VKDIPTFIILGFMGITSYFYIQFTGLQYTNTIHSALIIATSPIMVAIIGAALKIEKISRA
HHCCHHHHHHHHHHHHHEEEEEEECCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MSCGIALSFIGVSLVISEGNWAGIFQSTTIKGDLMLLSNAIVWAGFTLYGKKILLKYSPF
HHHHHHHHHHEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECHH
VAMAYIHIFGTLLLLPLLAVPDLLGTHSLMKQLAELSWPTVSAALYLALFCSVYAYFVWY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AGVEKIGAIRTSVFAYFNPLFATLTGVLLLNEKISFITIFGGCMVMAGVYITNEFKPKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHEECCCCCCCC
ARDNKKGLNISD
CCCCCCCCCCCC
>Mature Secondary Structure 
GRYIHLLLLTVSFFWGTSFAAAKIGLQELHPLNLVILRFTIASVIFYVLLQIRKERAIE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VKDIPTFIILGFMGITSYFYIQFTGLQYTNTIHSALIIATSPIMVAIIGAALKIEKISRA
HHCCHHHHHHHHHHHHHEEEEEEECCEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MSCGIALSFIGVSLVISEGNWAGIFQSTTIKGDLMLLSNAIVWAGFTLYGKKILLKYSPF
HHHHHHHHHHEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECHH
VAMAYIHIFGTLLLLPLLAVPDLLGTHSLMKQLAELSWPTVSAALYLALFCSVYAYFVWY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AGVEKIGAIRTSVFAYFNPLFATLTGVLLLNEKISFITIFGGCMVMAGVYITNEFKPKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHEECCCCCCCC
ARDNKKGLNISD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]