| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is zraS [H]
Identifier: 134299370
GI number: 134299370
Start: 1639691
End: 1641418
Strand: Reverse
Name: zraS [H]
Synonym: Dred_1511
Alternate gene names: 134299370
Gene position: 1641418-1639691 (Counterclockwise)
Preceding gene: 134299373
Following gene: 134299369
Centisome position: 45.49
GC content: 40.97
Gene sequence:
>1728_bases TTGCAACACCTCTTGAGTATTTTTCTAAAGTTTGTTTTATCTGATTATACGCTTATTGCTTTTATTTTTGCAATATATCG TGTTTTTTCGTTTTTGTATCTTTTCCTACACCTACTTGTAGTATATAATTCACATAAAGAAAAATATCCAAAAGGGAGGT CGATTTTACTGAATAATAAAAATATTTTTCCTTTCTTTAAACAAAATAGTCTAACTAATCAGATAGTAACTATTATTGCA GTGATTATGCTTGTACCTATTGTAGCATTGATGTATGACGTATTCTTCGCCTCCCAAACAGATAAGGTAATATTTCTAGA GAAAGAGCAGCGATTAAAAGCTCTGGTTAAGAGTACTAACCAAAGTTTTATGAAAAACCTTGAGTCTCTAAGAATAACTC CCGAGAATATCTCCTCAACCACACTGCATAATGAATTTACACGGGTGGTAGAGCCGCACCTGCCTGCTAATTCTGGCATC CGCTTCGGTCTCTATGTACCTCAAACAGAAAAAATCAAAGTACTGGGTTTCCTGCATAACTATCGTAATCTCTCCCCTGA AGAGGAAGCCCAGCGGGAAAAAATTATTTTCGCCAATACTAAGCCTCGCTTGGTGGCAACTGAAATGAGCAAGGAGCCCA ATTTTTACATTTCCGGTTCCTGGGATGACCAAGTTGTTGAGTACATTTCCCCTGTGATATTGCAAGGAAAAGTGGTAGCA GTTATGTGGGCAGGCGAACGTTTAAACCCCTTCTTCTACCAAAGCAATTATGCTCGGAAATTCCTTCGTTACTTTACTTT AGCAGTGTTGGCCATGGTCATGTTTGCAACCCTTTTAACAATCCGCAATATTACAACCGGTGTTGATCGTTTAAAAAAGG GGTTACATCGCATGGAACACGATATTCACCACCTACTGCCCGAGATGTCCGGCGAACTGGGCCAGGTAGCCCAGGCAGTT AACCGTATGGCCCTTGGCTTGTTGGAAAAGGAACGACTGGAAGACCAACTGCGTCAGTCGGAGCACCTTATTGCACTTGG CCGTCTGGCAACGGGCGTAGCTCACGAGTTGCGAAACCCCATCGGTATTATTAAAACCCTGGTGGAACTAATGAAAGATG AGTACTCTCAGGTTAGTGGTATCGATGAATTTACCAAAGCAGTTGACGAACAAGTGGATCGCCAAAACATGGTGATTCAA GAACTTCTAGATTTTGGCCGTCCAACAAAGGTATCTATTAAGGAATGTTCTGTTAATGACCTTCTAAAGGGTGTACTATC CTTCTCTGCTGCGATGTTGCGAAAAGAAAATGTAACGGTTCACTTGCATTTGGATGAAAGTCTGCCTAAAATCATGGCGG ATACTGAAAAACTTAAACAGGTATTTGTTAATCTTATTGTTAATGCTGCGGAGGCCATGCCATCCGGTGGAACATTGGAT ATTAAAACAGAGCAAAGTGAAAACTTGGTGACAGTCACCTTCTCGGACACGGGTGAAGGTATTGACTTAGAAGAAAAGTC TAAGATTTTTGATCCCTTTTACACGACCAAAAAGGCTGGCACTGGGCTTGGGCTTTCTATTTCTTACCAAAACATTAAGC TACATGAAGGAACCATTGAAGTGTCTAGTACCCGGAACAAAGGAACCACATTTACCATTCGGTTGCCAAGGAAAAAACAT ATCTCCGAGAGGAGGGATTGTCTTGATACCACGAATTCTGGTCATTGA
Upstream 100 bases:
>100_bases TTATTTGTGATTTAATTCTTTATATAGCAAAGTCTGTGCCAACATCATAATTCCTTTGTTTCCAAGCTTTCTTTAGAAAA ATACTCAAGAGGTGTAGCAA
Downstream 100 bases:
>100_bases TGATGAAGAAAGAATGTGCTGGGCCCTTGAGAGGGCATTAGGCCATGAAGGATACCAAGTGATAACAGCTACCCGGGGTC TTCGGGGTATTGAGTTAGCC
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MQHLLSIFLKFVLSDYTLIAFIFAIYRVFSFLYLFLHLLVVYNSHKEKYPKGRSILLNNKNIFPFFKQNSLTNQIVTIIA VIMLVPIVALMYDVFFASQTDKVIFLEKEQRLKALVKSTNQSFMKNLESLRITPENISSTTLHNEFTRVVEPHLPANSGI RFGLYVPQTEKIKVLGFLHNYRNLSPEEEAQREKIIFANTKPRLVATEMSKEPNFYISGSWDDQVVEYISPVILQGKVVA VMWAGERLNPFFYQSNYARKFLRYFTLAVLAMVMFATLLTIRNITTGVDRLKKGLHRMEHDIHHLLPEMSGELGQVAQAV NRMALGLLEKERLEDQLRQSEHLIALGRLATGVAHELRNPIGIIKTLVELMKDEYSQVSGIDEFTKAVDEQVDRQNMVIQ ELLDFGRPTKVSIKECSVNDLLKGVLSFSAAMLRKENVTVHLHLDESLPKIMADTEKLKQVFVNLIVNAAEAMPSGGTLD IKTEQSENLVTVTFSDTGEGIDLEEKSKIFDPFYTTKKAGTGLGLSISYQNIKLHEGTIEVSSTRNKGTTFTIRLPRKKH ISERRDCLDTTNSGH
Sequences:
>Translated_575_residues MQHLLSIFLKFVLSDYTLIAFIFAIYRVFSFLYLFLHLLVVYNSHKEKYPKGRSILLNNKNIFPFFKQNSLTNQIVTIIA VIMLVPIVALMYDVFFASQTDKVIFLEKEQRLKALVKSTNQSFMKNLESLRITPENISSTTLHNEFTRVVEPHLPANSGI RFGLYVPQTEKIKVLGFLHNYRNLSPEEEAQREKIIFANTKPRLVATEMSKEPNFYISGSWDDQVVEYISPVILQGKVVA VMWAGERLNPFFYQSNYARKFLRYFTLAVLAMVMFATLLTIRNITTGVDRLKKGLHRMEHDIHHLLPEMSGELGQVAQAV NRMALGLLEKERLEDQLRQSEHLIALGRLATGVAHELRNPIGIIKTLVELMKDEYSQVSGIDEFTKAVDEQVDRQNMVIQ ELLDFGRPTKVSIKECSVNDLLKGVLSFSAAMLRKENVTVHLHLDESLPKIMADTEKLKQVFVNLIVNAAEAMPSGGTLD IKTEQSENLVTVTFSDTGEGIDLEEKSKIFDPFYTTKKAGTGLGLSISYQNIKLHEGTIEVSSTRNKGTTFTIRLPRKKH ISERRDCLDTTNSGH >Mature_575_residues MQHLLSIFLKFVLSDYTLIAFIFAIYRVFSFLYLFLHLLVVYNSHKEKYPKGRSILLNNKNIFPFFKQNSLTNQIVTIIA VIMLVPIVALMYDVFFASQTDKVIFLEKEQRLKALVKSTNQSFMKNLESLRITPENISSTTLHNEFTRVVEPHLPANSGI RFGLYVPQTEKIKVLGFLHNYRNLSPEEEAQREKIIFANTKPRLVATEMSKEPNFYISGSWDDQVVEYISPVILQGKVVA VMWAGERLNPFFYQSNYARKFLRYFTLAVLAMVMFATLLTIRNITTGVDRLKKGLHRMEHDIHHLLPEMSGELGQVAQAV NRMALGLLEKERLEDQLRQSEHLIALGRLATGVAHELRNPIGIIKTLVELMKDEYSQVSGIDEFTKAVDEQVDRQNMVIQ ELLDFGRPTKVSIKECSVNDLLKGVLSFSAAMLRKENVTVHLHLDESLPKIMADTEKLKQVFVNLIVNAAEAMPSGGTLD IKTEQSENLVTVTFSDTGEGIDLEEKSKIFDPFYTTKKAGTGLGLSISYQNIKLHEGTIEVSSTRNKGTTFTIRLPRKKH ISERRDCLDTTNSGH
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=33.9130434782609, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI1788549, Length=231, Percent_Identity=38.5281385281385, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1790300, Length=242, Percent_Identity=29.7520661157025, Blast_Score=99, Evalue=9e-22, Organism=Escherichia coli, GI1788393, Length=304, Percent_Identity=25.6578947368421, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=27.5303643724696, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1786600, Length=216, Percent_Identity=25.462962962963, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87081816, Length=341, Percent_Identity=25.2199413489736, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1790861, Length=344, Percent_Identity=24.1279069767442, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1786783, Length=256, Percent_Identity=25.78125, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789808, Length=336, Percent_Identity=23.8095238095238, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082128, Length=334, Percent_Identity=24.8502994011976, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790346, Length=218, Percent_Identity=23.8532110091743, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=24.5762711864407, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789149, Length=321, Percent_Identity=22.7414330218069, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 65467; Mature: 65467
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLLSIFLKFVLSDYTLIAFIFAIYRVFSFLYLFLHLLVVYNSHKEKYPKGRSILLNNK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECC NIFPFFKQNSLTNQIVTIIAVIMLVPIVALMYDVFFASQTDKVIFLEKEQRLKALVKSTN CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCC QSFMKNLESLRITPENISSTTLHNEFTRVVEPHLPANSGIRFGLYVPQTEKIKVLGFLHN HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHH YRNLSPEEEAQREKIIFANTKPRLVATEMSKEPNFYISGSWDDQVVEYISPVILQGKVVA HCCCCCHHHHHHCEEEEECCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCEEE VMWAGERLNPFFYQSNYARKFLRYFTLAVLAMVMFATLLTIRNITTGVDRLKKGLHRMEH EEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIHHLLPEMSGELGQVAQAVNRMALGLLEKERLEDQLRQSEHLIALGRLATGVAHELRNP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH IGIIKTLVELMKDEYSQVSGIDEFTKAVDEQVDRQNMVIQELLDFGRPTKVSIKECSVND HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCHHH LLKGVLSFSAAMLRKENVTVHLHLDESLPKIMADTEKLKQVFVNLIVNAAEAMPSGGTLD HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE IKTEQSENLVTVTFSDTGEGIDLEEKSKIFDPFYTTKKAGTGLGLSISYQNIKLHEGTIE EEECCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHCCCCCCEEEEEECEEEEECCEEE VSSTRNKGTTFTIRLPRKKHISERRDCLDTTNSGH EECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQHLLSIFLKFVLSDYTLIAFIFAIYRVFSFLYLFLHLLVVYNSHKEKYPKGRSILLNNK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECC NIFPFFKQNSLTNQIVTIIAVIMLVPIVALMYDVFFASQTDKVIFLEKEQRLKALVKSTN CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHCC QSFMKNLESLRITPENISSTTLHNEFTRVVEPHLPANSGIRFGLYVPQTEKIKVLGFLHN HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHH YRNLSPEEEAQREKIIFANTKPRLVATEMSKEPNFYISGSWDDQVVEYISPVILQGKVVA HCCCCCHHHHHHCEEEEECCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHCCCEEE VMWAGERLNPFFYQSNYARKFLRYFTLAVLAMVMFATLLTIRNITTGVDRLKKGLHRMEH EEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIHHLLPEMSGELGQVAQAVNRMALGLLEKERLEDQLRQSEHLIALGRLATGVAHELRNP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH IGIIKTLVELMKDEYSQVSGIDEFTKAVDEQVDRQNMVIQELLDFGRPTKVSIKECSVND HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCHHH LLKGVLSFSAAMLRKENVTVHLHLDESLPKIMADTEKLKQVFVNLIVNAAEAMPSGGTLD HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE IKTEQSENLVTVTFSDTGEGIDLEEKSKIFDPFYTTKKAGTGLGLSISYQNIKLHEGTIE EEECCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHCCCCCCEEEEEECEEEEECCEEE VSSTRNKGTTFTIRLPRKKHISERRDCLDTTNSGH EECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]