| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299246
Identifier: 134299246
GI number: 134299246
Start: 1492387
End: 1493319
Strand: Reverse
Name: 134299246
Synonym: Dred_1387
Alternate gene names: NA
Gene position: 1493319-1492387 (Counterclockwise)
Preceding gene: 134299247
Following gene: 134299245
Centisome position: 41.39
GC content: 40.94
Gene sequence:
>933_bases ATGTGGGATTGGGACGATGACAATCCGTGGAAAAAAGAGGAGAAAAAATACAGTGACTGGCAAGACGATGGTAACGATTA TGACGACAGCCATTACGGTAATGTAGATTGCGGTCATGACCAACATTTGTTGTATAAAATTATCAAATGCTTATGTATTC TTAAGCGAGAAATAGCAAAATGCGAAGAAATGCTATGCAATCCTAGATTTGGTTTAAAAGAAATTAAGAAAGAAGTCTGG CGTATTGAACATGGTGTTTTTAGCCCCACCTTCGGCCTGCCGGAGATTAAGTCTGAAATATCCATGATACAAACCATAGT AGGCGGTATTCAAGATGAGATCTCAAACCCAACCTTTGGCCTCAGTGAGATTAAAACTGAAGTATCACAGATACTGGAAA TTTCTACTGAAATACGAGATATTGCTCTGGATATTGTCCTCAACCCAACCTTTGGTCTCAGTGAGATTAAAGCTGAAGTA TCTGCAATTGAAAACGCAGTATTTAGCGAGACTTATGGACTACAAGAAATCAAGTCTGAAGTAAGCCAGATACTAGCTAA CCAGGGTGTAACACCCTTTTTAACCTCCGGACCTTTCTTTGTTGATTGCGAAGAACAAACCCTTCTTCTGAAAGCCCTTA ACAATACCAATGAAACCCAAAGTGTAACCTTTACTATTCGTAATTTAGACAGTTGTCCGGTTACCGATGTAAGTGACGTA TTCTTAACTATCCCTGCCTGCTGTGGAGAGTCTGAAGAGGTCTCTCTACCTAGTTACGGTGAAAGAAATGTTGAAGTCAG GGCCATGCTTAGCTCTGCCACTGGAGTCCTGGTTTATGCTGCAACAAAAACCGGTCTACCCGATAGCCAAGGCAGCAAGG TTAATGAATTTAAACATGCGGAATGGGTACCTGTAGCAACTTTCTGTAGCTAA
Upstream 100 bases:
>100_bases TGTCTTTAAGTTAGTTTAATTACTTTAATAACCCACATAAGTAACAAATATCTTAATTTGTCATATTATGTAAGAGAACA TTATGAAGGAGGTTTTTCTT
Downstream 100 bases:
>100_bases CCAAATATAACCTGGTCGGCAAGCTCGTTGCCGACCTTATTTTTTTCACCCTATTACACTCCACTACATATACTGGCTTA GAGACTTCAAGGGAGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MWDWDDDNPWKKEEKKYSDWQDDGNDYDDSHYGNVDCGHDQHLLYKIIKCLCILKREIAKCEEMLCNPRFGLKEIKKEVW RIEHGVFSPTFGLPEIKSEISMIQTIVGGIQDEISNPTFGLSEIKTEVSQILEISTEIRDIALDIVLNPTFGLSEIKAEV SAIENAVFSETYGLQEIKSEVSQILANQGVTPFLTSGPFFVDCEEQTLLLKALNNTNETQSVTFTIRNLDSCPVTDVSDV FLTIPACCGESEEVSLPSYGERNVEVRAMLSSATGVLVYAATKTGLPDSQGSKVNEFKHAEWVPVATFCS
Sequences:
>Translated_310_residues MWDWDDDNPWKKEEKKYSDWQDDGNDYDDSHYGNVDCGHDQHLLYKIIKCLCILKREIAKCEEMLCNPRFGLKEIKKEVW RIEHGVFSPTFGLPEIKSEISMIQTIVGGIQDEISNPTFGLSEIKTEVSQILEISTEIRDIALDIVLNPTFGLSEIKAEV SAIENAVFSETYGLQEIKSEVSQILANQGVTPFLTSGPFFVDCEEQTLLLKALNNTNETQSVTFTIRNLDSCPVTDVSDV FLTIPACCGESEEVSLPSYGERNVEVRAMLSSATGVLVYAATKTGLPDSQGSKVNEFKHAEWVPVATFCS >Mature_310_residues MWDWDDDNPWKKEEKKYSDWQDDGNDYDDSHYGNVDCGHDQHLLYKIIKCLCILKREIAKCEEMLCNPRFGLKEIKKEVW RIEHGVFSPTFGLPEIKSEISMIQTIVGGIQDEISNPTFGLSEIKTEVSQILEISTEIRDIALDIVLNPTFGLSEIKAEV SAIENAVFSETYGLQEIKSEVSQILANQGVTPFLTSGPFFVDCEEQTLLLKALNNTNETQSVTFTIRNLDSCPVTDVSDV FLTIPACCGESEEVSLPSYGERNVEVRAMLSSATGVLVYAATKTGLPDSQGSKVNEFKHAEWVPVATFCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34668; Mature: 34668
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDWDDDNPWKKEEKKYSDWQDDGNDYDDSHYGNVDCGHDQHLLYKIIKCLCILKREIAK CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH CEEMLCNPRFGLKEIKKEVWRIEHGVFSPTFGLPEIKSEISMIQTIVGGIQDEISNPTFG HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LSEIKTEVSQILEISTEIRDIALDIVLNPTFGLSEIKAEVSAIENAVFSETYGLQEIKSE HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH VSQILANQGVTPFLTSGPFFVDCEEQTLLLKALNNTNETQSVTFTIRNLDSCPVTDVSDV HHHHHHHCCCCCEECCCCEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHH FLTIPACCGESEEVSLPSYGERNVEVRAMLSSATGVLVYAATKTGLPDSQGSKVNEFKHA HHHHHHHCCCCCCCCCCCCCCCCEEHEEEHHCCCEEEEEEEECCCCCCCCCCCHHHHCCC EWVPVATFCS CCCCHHHCCC >Mature Secondary Structure MWDWDDDNPWKKEEKKYSDWQDDGNDYDDSHYGNVDCGHDQHLLYKIIKCLCILKREIAK CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH CEEMLCNPRFGLKEIKKEVWRIEHGVFSPTFGLPEIKSEISMIQTIVGGIQDEISNPTFG HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC LSEIKTEVSQILEISTEIRDIALDIVLNPTFGLSEIKAEVSAIENAVFSETYGLQEIKSE HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH VSQILANQGVTPFLTSGPFFVDCEEQTLLLKALNNTNETQSVTFTIRNLDSCPVTDVSDV HHHHHHHCCCCCEECCCCEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHH FLTIPACCGESEEVSLPSYGERNVEVRAMLSSATGVLVYAATKTGLPDSQGSKVNEFKHA HHHHHHHCCCCCCCCCCCCCCCCEEHEEEHHCCCEEEEEEEECCCCCCCCCCCHHHHCCC EWVPVATFCS CCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA