| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299187
Identifier: 134299187
GI number: 134299187
Start: 1415758
End: 1416330
Strand: Reverse
Name: 134299187
Synonym: Dred_1324
Alternate gene names: NA
Gene position: 1416330-1415758 (Counterclockwise)
Preceding gene: 134299194
Following gene: 134299184
Centisome position: 39.25
GC content: 40.14
Gene sequence:
>573_bases TTGGCAAAGAACAACAAAGATATTTACTGCCAGGAACGTGAAGGTAAAAAAGTCTACTATGGTTCCATGATGAAATACAA AAAGGAACTCAAAAGAGAAATCAGGGTGGTTTACAAGATTACAGAAAGAACCTTTGGCAAAGATGGTCAAATATTTCTGG TACCTCAGGTGGAGGCAGAAACCTATTGGACATCGCTGCCAGATCCACCGCATGTAATCGAAAGACTATACCATGAACAC GGCACCAGCGAGCAGTTTCACAGTGAACTTAAGACAGACCTAGATTTAGAAAGACTACCCTCTGGTAAATTTGATACTAA CAACCTGGTGTTACATTTTGGTATAGTGGCCTACAATCTGTTAAGGATGATTGGTCAATCCACAACCAGGATGCAGCATG TACCTCTACGTAAGCAGGCAGAACGCCGCAGGATTAGGACTGTGATTCAGAATTTAATCACGTTAGCATCACGATTAGTG TCACATACAAGAAAAAAGAAATTACAATTTGGAAAGCACAGTCCTTGGTTTGAAACATTTAAACAAGCATACTTTGTGTG TTTAGCAAGGTAG
Upstream 100 bases:
>100_bases GACATATCTAGCAAAGGAAGGTTATTGCGTAAATACTGAGTTACGCCAAGGAAGTGAACATTGCCAAAAGAACACTTCGA AATTTGTTGCCGAAAGCATA
Downstream 100 bases:
>100_bases AAATATCCACAAAACAATAAAGTTTTTGCGCTCAAAGAAGTGCTTAGATTGTTATTGCCAAATTTAGGTTTAAAACCGTT AAGGTAATAATTACAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; Transposase For Insertion Sequence Element
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAKNNKDIYCQEREGKKVYYGSMMKYKKELKREIRVVYKITERTFGKDGQIFLVPQVEAETYWTSLPDPPHVIERLYHEH GTSEQFHSELKTDLDLERLPSGKFDTNNLVLHFGIVAYNLLRMIGQSTTRMQHVPLRKQAERRRIRTVIQNLITLASRLV SHTRKKKLQFGKHSPWFETFKQAYFVCLAR
Sequences:
>Translated_190_residues MAKNNKDIYCQEREGKKVYYGSMMKYKKELKREIRVVYKITERTFGKDGQIFLVPQVEAETYWTSLPDPPHVIERLYHEH GTSEQFHSELKTDLDLERLPSGKFDTNNLVLHFGIVAYNLLRMIGQSTTRMQHVPLRKQAERRRIRTVIQNLITLASRLV SHTRKKKLQFGKHSPWFETFKQAYFVCLAR >Mature_189_residues AKNNKDIYCQEREGKKVYYGSMMKYKKELKREIRVVYKITERTFGKDGQIFLVPQVEAETYWTSLPDPPHVIERLYHEHG TSEQFHSELKTDLDLERLPSGKFDTNNLVLHFGIVAYNLLRMIGQSTTRMQHVPLRKQAERRRIRTVIQNLITLASRLVS HTRKKKLQFGKHSPWFETFKQAYFVCLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22561; Mature: 22429
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNNKDIYCQEREGKKVYYGSMMKYKKELKREIRVVYKITERTFGKDGQIFLVPQVEAE CCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH TYWTSLPDPPHVIERLYHEHGTSEQFHSELKTDLDLERLPSGKFDTNNLVLHFGIVAYNL HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHH LRMIGQSTTRMQHVPLRKQAERRRIRTVIQNLITLASRLVSHTRKKKLQFGKHSPWFETF HHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KQAYFVCLAR HHHHHHHHCC >Mature Secondary Structure AKNNKDIYCQEREGKKVYYGSMMKYKKELKREIRVVYKITERTFGKDGQIFLVPQVEAE CCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH TYWTSLPDPPHVIERLYHEHGTSEQFHSELKTDLDLERLPSGKFDTNNLVLHFGIVAYNL HHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHH LRMIGQSTTRMQHVPLRKQAERRRIRTVIQNLITLASRLVSHTRKKKLQFGKHSPWFETF HHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KQAYFVCLAR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA