| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is cat2 [H]
Identifier: 134299178
GI number: 134299178
Start: 1406772
End: 1408097
Strand: Reverse
Name: cat2 [H]
Synonym: Dred_1315
Alternate gene names: 134299178
Gene position: 1408097-1406772 (Counterclockwise)
Preceding gene: 134299180
Following gene: 134299143
Centisome position: 39.03
GC content: 42.16
Gene sequence:
>1326_bases TTGGTATGGTTTAAAGCGGGTCCGTTATTTGAAGACTCTGATAAGTTGCTCAAAATGTATGAAGAAAAACGTATTTCAGC AAAGGAAGCTGTAGCCGTTATTTCTTCTGGGGATAATATAGTAGTACCGCCCGGTGCTGCCGAGCCAGAATTGTTAATGG AAAGCCTGGCAAATCGGAAGGGAGAATTAAAGGACGTCAGAATTCACCAAATGCTGCCTCTACGCGAGGCCAGTTACCTA AAACCTGGCATGGAAAAACATTTTCGCCATGTTTCTTGGTTAACAAGTAGTGTAGTAAAAAGAGGGGTAAAAGAAGGGCG GGCCGGCGTCATGCCCGGCTATTTATATGAGTATCCACAGTTTATCCGGGACATGGAAGTCGACGTTTTTATGGGTACGG TTTCTCCTATGGATGAACATGGCTATTTCAGCTTTGGTGTTTCTGTTGATTACACCATAGCCGCAGCTGGTTGCGCTAAG AAGGTAATCTTATTGGTTAACCCCAATATGCCTAGAACCATGGGTTACAGCTTTATTCATGTATCCCAGGCTGATATGAT TGTAGAGGACAGTTCCCCTCTTTTAGAAGTTCCCAAACCAACCCTTAGTAAAAATGATTCTAAAATTGGGGACTATGTAT GTCAGATCGTGGAGGATGGCTCAACAATACAACTTGGACTGGGCTCCTTAGCCAATTCTGTTGCTCAGTGTCTCTCTGTT AAAAAAGGGTTGGGTATTCATAGTCACTTTATTACAGATTCCATAGTGGACTTAGTAGAATGTGGCGCCATAACGAATCG GCGTAAAAAATTACACCTAGGTAAAATTATCTGCAGTTCCGCTGTGGGTACCAAACGTTTATATCAATTCATAAATAATA ATCCTTTATTTGAATTTCATTCCGTTTCTTATACAAATGACCCCATGGTCATTGCAAAAAATAATAATATGGTAGCAATC AACTCCGTGGAAGAAATAGATCTTTTAGGTCAGTGCGCTTCTGAACCAATAGGCCCTAAATTATATTCCGGAACCGGAGA GCAGGTTGATTTTGCACGGGGTGCCATGAATGCTGACAATGGGAAAAGCATTGTCGTACTTCATTCCACTCTTAAGGGAA GAACAAAAATAGTACCCGTCTTAGAGAGTGGTTCCGTAGTAAGTCTCAGCAAAAATGACGTTGATTATGTTGTCACGGAG TATGGTTTTGCCCGATTAAGAGGAAAAACCTACCGTCAAAGGGCGGAATCACTCATTGCCATTGCCCATCCGGACCATCG AGATGGTCTAACAGAGGCTGCAAAAAAGTTTGGTCTAACCAGATAA
Upstream 100 bases:
>100_bases TCCCTTTGTAATTTCTTTAAAATATGACAACATCTTTCTTTCATTAGCTGATTAAAAGTGATATAATTCACTTAAAGTTG CACTCTGGAGGTGATTGTTT
Downstream 100 bases:
>100_bases AAAATATATAACAATATACCCTATAACCCGCATTGCCTGGCAATGCGGGTTATTTATTGCCAAATCTGTTTCAGCAGCTG TGCCCTTCTTTCTTGTTCTC
Product: acetyl-CoA hydrolase/transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MVWFKAGPLFEDSDKLLKMYEEKRISAKEAVAVISSGDNIVVPPGAAEPELLMESLANRKGELKDVRIHQMLPLREASYL KPGMEKHFRHVSWLTSSVVKRGVKEGRAGVMPGYLYEYPQFIRDMEVDVFMGTVSPMDEHGYFSFGVSVDYTIAAAGCAK KVILLVNPNMPRTMGYSFIHVSQADMIVEDSSPLLEVPKPTLSKNDSKIGDYVCQIVEDGSTIQLGLGSLANSVAQCLSV KKGLGIHSHFITDSIVDLVECGAITNRRKKLHLGKIICSSAVGTKRLYQFINNNPLFEFHSVSYTNDPMVIAKNNNMVAI NSVEEIDLLGQCASEPIGPKLYSGTGEQVDFARGAMNADNGKSIVVLHSTLKGRTKIVPVLESGSVVSLSKNDVDYVVTE YGFARLRGKTYRQRAESLIAIAHPDHRDGLTEAAKKFGLTR
Sequences:
>Translated_441_residues MVWFKAGPLFEDSDKLLKMYEEKRISAKEAVAVISSGDNIVVPPGAAEPELLMESLANRKGELKDVRIHQMLPLREASYL KPGMEKHFRHVSWLTSSVVKRGVKEGRAGVMPGYLYEYPQFIRDMEVDVFMGTVSPMDEHGYFSFGVSVDYTIAAAGCAK KVILLVNPNMPRTMGYSFIHVSQADMIVEDSSPLLEVPKPTLSKNDSKIGDYVCQIVEDGSTIQLGLGSLANSVAQCLSV KKGLGIHSHFITDSIVDLVECGAITNRRKKLHLGKIICSSAVGTKRLYQFINNNPLFEFHSVSYTNDPMVIAKNNNMVAI NSVEEIDLLGQCASEPIGPKLYSGTGEQVDFARGAMNADNGKSIVVLHSTLKGRTKIVPVLESGSVVSLSKNDVDYVVTE YGFARLRGKTYRQRAESLIAIAHPDHRDGLTEAAKKFGLTR >Mature_441_residues MVWFKAGPLFEDSDKLLKMYEEKRISAKEAVAVISSGDNIVVPPGAAEPELLMESLANRKGELKDVRIHQMLPLREASYL KPGMEKHFRHVSWLTSSVVKRGVKEGRAGVMPGYLYEYPQFIRDMEVDVFMGTVSPMDEHGYFSFGVSVDYTIAAAGCAK KVILLVNPNMPRTMGYSFIHVSQADMIVEDSSPLLEVPKPTLSKNDSKIGDYVCQIVEDGSTIQLGLGSLANSVAQCLSV KKGLGIHSHFITDSIVDLVECGAITNRRKKLHLGKIICSSAVGTKRLYQFINNNPLFEFHSVSYTNDPMVIAKNNNMVAI NSVEEIDLLGQCASEPIGPKLYSGTGEQVDFARGAMNADNGKSIVVLHSTLKGRTKIVPVLESGSVVSLSKNDVDYVVTE YGFARLRGKTYRQRAESLIAIAHPDHRDGLTEAAKKFGLTR
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=471, Percent_Identity=23.1422505307856, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI32563853, Length=422, Percent_Identity=39.0995260663507, Blast_Score=280, Evalue=7e-76, Organism=Caenorhabditis elegans, GI17538151, Length=425, Percent_Identity=36.9411764705882, Blast_Score=273, Evalue=2e-73, Organism=Drosophila melanogaster, GI21358615, Length=418, Percent_Identity=39.2344497607655, Blast_Score=293, Evalue=2e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 48462; Mature: 48462
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWFKAGPLFEDSDKLLKMYEEKRISAKEAVAVISSGDNIVVPPGAAEPELLMESLANRK CCEECCCCCCCCHHHHHHHHHHHCCCHHHHEEEEECCCEEEECCCCCCHHHHHHHHHCCC GELKDVRIHQMLPLREASYLKPGMEKHFRHVSWLTSSVVKRGVKEGRAGVMPGYLYEYPQ CCCCEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH FIRDMEVDVFMGTVSPMDEHGYFSFGVSVDYTIAAAGCAKKVILLVNPNMPRTMGYSFIH HHHCCCEEEEEECCCCCCCCCEEEECCEEEEEEEECCCCEEEEEEECCCCCHHHCCEEEE VSQADMIVEDSSPLLEVPKPTLSKNDSKIGDYVCQIVEDGSTIQLGLGSLANSVAQCLSV EECCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH KKGLGIHSHFITDSIVDLVECGAITNRRKKLHLGKIICSSAVGTKRLYQFINNNPLFEFH HHCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEE SVSYTNDPMVIAKNNNMVAINSVEEIDLLGQCASEPIGPKLYSGTGEQVDFARGAMNADN ECEECCCCEEEEECCCEEEECCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHCCCCCCC GKSIVVLHSTLKGRTKIVPVLESGSVVSLSKNDVDYVVTEYGFARLRGKTYRQRAESLIA CCEEEEEECCCCCCEEEEEEECCCCEEEECCCCCCEEEEHHHHHHHCCHHHHHHHHCEEE IAHPDHRDGLTEAAKKFGLTR EECCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MVWFKAGPLFEDSDKLLKMYEEKRISAKEAVAVISSGDNIVVPPGAAEPELLMESLANRK CCEECCCCCCCCHHHHHHHHHHHCCCHHHHEEEEECCCEEEECCCCCCHHHHHHHHHCCC GELKDVRIHQMLPLREASYLKPGMEKHFRHVSWLTSSVVKRGVKEGRAGVMPGYLYEYPQ CCCCEEHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH FIRDMEVDVFMGTVSPMDEHGYFSFGVSVDYTIAAAGCAKKVILLVNPNMPRTMGYSFIH HHHCCCEEEEEECCCCCCCCCEEEECCEEEEEEEECCCCEEEEEEECCCCCHHHCCEEEE VSQADMIVEDSSPLLEVPKPTLSKNDSKIGDYVCQIVEDGSTIQLGLGSLANSVAQCLSV EECCCEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH KKGLGIHSHFITDSIVDLVECGAITNRRKKLHLGKIICSSAVGTKRLYQFINNNPLFEFH HHCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEE SVSYTNDPMVIAKNNNMVAINSVEEIDLLGQCASEPIGPKLYSGTGEQVDFARGAMNADN ECEECCCCEEEEECCCEEEECCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHCCCCCCC GKSIVVLHSTLKGRTKIVPVLESGSVVSLSKNDVDYVVTEYGFARLRGKTYRQRAESLIA CCEEEEEECCCCCCEEEEEEECCCCEEEECCCCCCEEEEHHHHHHHCCHHHHHHHHCEEE IAHPDHRDGLTEAAKKFGLTR EECCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]