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The map label for this gene is yqjB [H]

Identifier: 134299121

GI number: 134299121

Start: 1329950

End: 1330834

Strand: Reverse

Name: yqjB [H]

Synonym: Dred_1258

Alternate gene names: 134299121

Gene position: 1330834-1329950 (Counterclockwise)

Preceding gene: 134299143

Following gene: 134299120

Centisome position: 36.88

GC content: 38.19

Gene sequence:

>885_bases
ATGTCGTTCTTCATTTTTACACCCATTGCCGGAGCAACCGAAAAAAGTAAAATGATTATAATTAACAAAAAAACAAATCA
ACTAGGATTCTACGAAGACGGTTTGCTCTCAAAAGTGTTTCCTGTTGCTACCGGTAGACAACGCAGTTTCACACCTGAAG
GAAATTTTAGAGTAATTAACAAACAGCTAAACCCACCCTATTACAAAAAGAATATTCCAGGAGGCAGTCCCTATAACCCC
CTGGGTCCCCGTTGGTTGGGGCTAAGTGCACCTGGTGGTCCCTATGGTATACATGGCAATAGTAATCCCGCTTCCATTGG
CACCTATGCTTCTAATGGTTGTATTCGTCTTTTTAATAATGATATCCTTTGGCTTTATGAGCAGGTACCCCTGGGTACAC
CAGTTATTATTGTCTGGAATAACATTAATTTAAACGAAGGCTTTGTTGACACAAAACCAATAAAGTTATACTTTAATAAT
GAATCAATAGAAGCCAATCAATTCAAACTTTTTTCTAAACAAGATAAGCCTTATTTGCCATTAAAACTCCTATGCCAGCT
ACTTGACTATGGCCTTAACTGGGACAATACAGCAAGTACAGTTAGCGTAACCAAATCTGACTTTATTACCCAATTAACAC
CCAATGAACAAACTGCAATCATTAATGGCCAAACCTCCTCCTTGGCAGATATTCCGTTGTTGGTGGATGGAACTACCTTT
GTCACTATTTCAACAGTTAAGCAAATCTTTAATGTGGATATCCAATGGCATTCGGAGACAAGAGAGGTTTTTCTTTATTC
AATTGAGTCAGATAAAATGTTAACTGATACAACTCAAAGGCCCGCAGAATGGATTGTCAATTTACCGGATCTCATAAATC
AGTAG

Upstream 100 bases:

>100_bases
AAATAAATATGTAACAGTACTAAAACCTTACAAGGAGGGGTTATTTACGTTTAGTAAAAGTATCTCTCTCTGGCGTACGG
CATTAGTCGTTTTTCTGACT

Downstream 100 bases:

>100_bases
TCGATAACAAGTTAGAAAAATAAAATAGCAGGATTATTTAGCATCCAAATAGAAATTGAATATAGAAATATTCAATACTA
GTGTCAGGAGTGAAAAGCAT

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSFFIFTPIAGATEKSKMIIINKKTNQLGFYEDGLLSKVFPVATGRQRSFTPEGNFRVINKQLNPPYYKKNIPGGSPYNP
LGPRWLGLSAPGGPYGIHGNSNPASIGTYASNGCIRLFNNDILWLYEQVPLGTPVIIVWNNINLNEGFVDTKPIKLYFNN
ESIEANQFKLFSKQDKPYLPLKLLCQLLDYGLNWDNTASTVSVTKSDFITQLTPNEQTAIINGQTSSLADIPLLVDGTTF
VTISTVKQIFNVDIQWHSETREVFLYSIESDKMLTDTTQRPAEWIVNLPDLINQ

Sequences:

>Translated_294_residues
MSFFIFTPIAGATEKSKMIIINKKTNQLGFYEDGLLSKVFPVATGRQRSFTPEGNFRVINKQLNPPYYKKNIPGGSPYNP
LGPRWLGLSAPGGPYGIHGNSNPASIGTYASNGCIRLFNNDILWLYEQVPLGTPVIIVWNNINLNEGFVDTKPIKLYFNN
ESIEANQFKLFSKQDKPYLPLKLLCQLLDYGLNWDNTASTVSVTKSDFITQLTPNEQTAIINGQTSSLADIPLLVDGTTF
VTISTVKQIFNVDIQWHSETREVFLYSIESDKMLTDTTQRPAEWIVNLPDLINQ
>Mature_293_residues
SFFIFTPIAGATEKSKMIIINKKTNQLGFYEDGLLSKVFPVATGRQRSFTPEGNFRVINKQLNPPYYKKNIPGGSPYNPL
GPRWLGLSAPGGPYGIHGNSNPASIGTYASNGCIRLFNNDILWLYEQVPLGTPVIIVWNNINLNEGFVDTKPIKLYFNNE
SIEANQFKLFSKQDKPYLPLKLLCQLLDYGLNWDNTASTVSVTKSDFITQLTPNEQTAIINGQTSSLADIPLLVDGTTFV
TISTVKQIFNVDIQWHSETREVFLYSIESDKMLTDTTQRPAEWIVNLPDLINQ

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=137, Percent_Identity=35.036496350365, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 32978; Mature: 32847

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFIFTPIAGATEKSKMIIINKKTNQLGFYEDGLLSKVFPVATGRQRSFTPEGNFRVIN
CEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEE
KQLNPPYYKKNIPGGSPYNPLGPRWLGLSAPGGPYGIHGNSNPASIGTYASNGCIRLFNN
ECCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCEECEECCCCEEEEECC
DILWLYEQVPLGTPVIIVWNNINLNEGFVDTKPIKLYFNNESIEANQFKLFSKQDKPYLP
CEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCC
LKLLCQLLDYGLNWDNTASTVSVTKSDFITQLTPNEQTAIINGQTSSLADIPLLVDGTTF
HHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCCCCCCCEEEECCCEE
VTISTVKQIFNVDIQWHSETREVFLYSIESDKMLTDTTQRPAEWIVNLPDLINQ
EEHHHHHHHHEEEEEEECCCEEEEEEEECCCCEEECCCCCCHHHEECCHHHHCC
>Mature Secondary Structure 
SFFIFTPIAGATEKSKMIIINKKTNQLGFYEDGLLSKVFPVATGRQRSFTPEGNFRVIN
EEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEE
KQLNPPYYKKNIPGGSPYNPLGPRWLGLSAPGGPYGIHGNSNPASIGTYASNGCIRLFNN
ECCCCCHHCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCEECEECCCCEEEEECC
DILWLYEQVPLGTPVIIVWNNINLNEGFVDTKPIKLYFNNESIEANQFKLFSKQDKPYLP
CEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCC
LKLLCQLLDYGLNWDNTASTVSVTKSDFITQLTPNEQTAIINGQTSSLADIPLLVDGTTF
HHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCEEEEECCCCCCCCCEEEECCCEE
VTISTVKQIFNVDIQWHSETREVFLYSIESDKMLTDTTQRPAEWIVNLPDLINQ
EEHHHHHHHHEEEEEEECCCEEEEEEEECCCCEEECCCCCCHHHEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]