| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134299106
Identifier: 134299106
GI number: 134299106
Start: 1316960
End: 1318111
Strand: Reverse
Name: 134299106
Synonym: Dred_1243
Alternate gene names: NA
Gene position: 1318111-1316960 (Counterclockwise)
Preceding gene: 134299107
Following gene: 134299103
Centisome position: 36.53
GC content: 40.19
Gene sequence:
>1152_bases TTGTCACTTCATATTTCTGAGAACAGATTGTTTGAATATTTAGTGGCGTATATCTTACGCAATAATGGTTATATTGCTGG TGTACCTCGGCGTAAATTAGGCGGACGAGGTACGCAACACGAGATTGGGGTGATTGGGATTGATTTAAATAATAGTCCCT TTTGCTTAAACACTGTGCTTTTAGTAGCCGCTCGGGGGCAAGCTCAGTCAAATCCTACTTCGGACATGCAGTTAGTCCGA AACTTAAAAGCAACGCTCTTAGATCTTGAACAAACATTACCGCCACGGCGAGAACTCATTCGCGATCTGCTGGATAATAA TCGAGGCGACTTATTTCACCGGATATATGGAGGGAAAAGAATGAAGGAAACACTTACCGTTAATTATGTAGGGGGAGTTT TTGTTTCCAGTGAGTTCTCCTATCCTGCCTGGGAATATGCAAACGCCCATGGCATCTATGTGGTACACTTGCCGGATTGC ATCGCTGGAAAACCGGTACATCAATGGTATCAAAGAATACGTTCGTCAATGTCCAAAATTAGAGATGAAAACGATAAATT TACCCTCCCGGGACTGGCTAAGAAAACAAAAAAACATTTAGATTTCCTCAATGTTATAACGTTTCTTCAAAGATCACCTG AAGGAGAATTGAAACCTGAACACAGTCATGATCTTTTTACCATATTCAATGAATTACTTCGTACCCAAGACATGACTCCA TTAGCCAAGCATCTGCAAAGAACTGCCTTGGCCACTATCAATGGTTACCCGGTAGTTCTAGAGTATAATCTTAGTTACAA AGCACTCTTAGATGCAGCCCTTACCATCTATGAACGAAAGATCAGGACCATTAAATCTGTTGTTCCTGCTACCACCTATA AGCCTTTGGATGTTGTTCATTTAGAAATAACTTCTGTTACACCCACCAAGGATCATCATGTGAGCAAATTTACTTATCAG GTGGTTCAAGAAAATGTCCCTACTACCATTCAAAATTTAGCTGGTGCTGTATATATACCAAATACAGTCTTGGACAAACG TTCTTTGCAAAGGTTCCGCCTAAAAATGCCATTAAAGGCAGGACTAAGTTTAGTTTGTGAATTTTCACCACAACAGGGTA TTCTGTTAGAACCTCAGATAATCGAAAGATAA
Upstream 100 bases:
>100_bases ATTTATATGCACCTATAACAATAGCTGGAACCGCTAATAAACTTTTCCTTTTTGGTCATACTTAATTTAGTACTATTTCT TTTTATTTCGGAGGTGCCCA
Downstream 100 bases:
>100_bases AAACCAGGCTTCCCTGGTTTTTAATTATATTGTGATAACTTTATCTCTGCCAGTCAAGTTTTCTAATATTTCTAGCATAT TGGTAACACGCCCAACAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSLHISENRLFEYLVAYILRNNGYIAGVPRRKLGGRGTQHEIGVIGIDLNNSPFCLNTVLLVAARGQAQSNPTSDMQLVR NLKATLLDLEQTLPPRRELIRDLLDNNRGDLFHRIYGGKRMKETLTVNYVGGVFVSSEFSYPAWEYANAHGIYVVHLPDC IAGKPVHQWYQRIRSSMSKIRDENDKFTLPGLAKKTKKHLDFLNVITFLQRSPEGELKPEHSHDLFTIFNELLRTQDMTP LAKHLQRTALATINGYPVVLEYNLSYKALLDAALTIYERKIRTIKSVVPATTYKPLDVVHLEITSVTPTKDHHVSKFTYQ VVQENVPTTIQNLAGAVYIPNTVLDKRSLQRFRLKMPLKAGLSLVCEFSPQQGILLEPQIIER
Sequences:
>Translated_383_residues MSLHISENRLFEYLVAYILRNNGYIAGVPRRKLGGRGTQHEIGVIGIDLNNSPFCLNTVLLVAARGQAQSNPTSDMQLVR NLKATLLDLEQTLPPRRELIRDLLDNNRGDLFHRIYGGKRMKETLTVNYVGGVFVSSEFSYPAWEYANAHGIYVVHLPDC IAGKPVHQWYQRIRSSMSKIRDENDKFTLPGLAKKTKKHLDFLNVITFLQRSPEGELKPEHSHDLFTIFNELLRTQDMTP LAKHLQRTALATINGYPVVLEYNLSYKALLDAALTIYERKIRTIKSVVPATTYKPLDVVHLEITSVTPTKDHHVSKFTYQ VVQENVPTTIQNLAGAVYIPNTVLDKRSLQRFRLKMPLKAGLSLVCEFSPQQGILLEPQIIER >Mature_382_residues SLHISENRLFEYLVAYILRNNGYIAGVPRRKLGGRGTQHEIGVIGIDLNNSPFCLNTVLLVAARGQAQSNPTSDMQLVRN LKATLLDLEQTLPPRRELIRDLLDNNRGDLFHRIYGGKRMKETLTVNYVGGVFVSSEFSYPAWEYANAHGIYVVHLPDCI AGKPVHQWYQRIRSSMSKIRDENDKFTLPGLAKKTKKHLDFLNVITFLQRSPEGELKPEHSHDLFTIFNELLRTQDMTPL AKHLQRTALATINGYPVVLEYNLSYKALLDAALTIYERKIRTIKSVVPATTYKPLDVVHLEITSVTPTKDHHVSKFTYQV VQENVPTTIQNLAGAVYIPNTVLDKRSLQRFRLKMPLKAGLSLVCEFSPQQGILLEPQIIER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43540; Mature: 43409
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHISENRLFEYLVAYILRNNGYIAGVPRRKLGGRGTQHEIGVIGIDLNNSPFCLNTVL CEEECCHHHHHHHHHHHHHHCCCEEECCCCHHHCCCCCCCEEEEEEEECCCCCHHHHHHH LVAARGQAQSNPTSDMQLVRNLKATLLDLEQTLPPRRELIRDLLDNNRGDLFHRIYGGKR HHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCH MKETLTVNYVGGVFVSSEFSYPAWEYANAHGIYVVHLPDCIAGKPVHQWYQRIRSSMSKI HHHEEEEEEECCEEEECCCCCCCHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH RDENDKFTLPGLAKKTKKHLDFLNVITFLQRSPEGELKPEHSHDLFTIFNELLRTQDMTP CCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH LAKHLQRTALATINGYPVVLEYNLSYKALLDAALTIYERKIRTIKSVVPATTYKPLDVVH HHHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE LEITSVTPTKDHHVSKFTYQVVQENVPTTIQNLAGAVYIPNTVLDKRSLQRFRLKMPLKA EEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHCCCHHH GLSLVCEFSPQQGILLEPQIIER CCEEEEEECCCCCEEECCHHHCC >Mature Secondary Structure SLHISENRLFEYLVAYILRNNGYIAGVPRRKLGGRGTQHEIGVIGIDLNNSPFCLNTVL EEECCHHHHHHHHHHHHHHCCCEEECCCCHHHCCCCCCCEEEEEEEECCCCCHHHHHHH LVAARGQAQSNPTSDMQLVRNLKATLLDLEQTLPPRRELIRDLLDNNRGDLFHRIYGGKR HHEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCH MKETLTVNYVGGVFVSSEFSYPAWEYANAHGIYVVHLPDCIAGKPVHQWYQRIRSSMSKI HHHEEEEEEECCEEEECCCCCCCHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH RDENDKFTLPGLAKKTKKHLDFLNVITFLQRSPEGELKPEHSHDLFTIFNELLRTQDMTP CCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCH LAKHLQRTALATINGYPVVLEYNLSYKALLDAALTIYERKIRTIKSVVPATTYKPLDVVH HHHHHHHHHHHEECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE LEITSVTPTKDHHVSKFTYQVVQENVPTTIQNLAGAVYIPNTVLDKRSLQRFRLKMPLKA EEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHCCCHHH GLSLVCEFSPQQGILLEPQIIER CCEEEEEECCCCCEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA