| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299038
Identifier: 134299038
GI number: 134299038
Start: 1248899
End: 1249654
Strand: Reverse
Name: 134299038
Synonym: Dred_1175
Alternate gene names: NA
Gene position: 1249654-1248899 (Counterclockwise)
Preceding gene: 134299039
Following gene: 134299033
Centisome position: 34.63
GC content: 41.4
Gene sequence:
>756_bases ATGAAAAGTCTTGCTGTTTTTTCATTAAAACAATTATCCATACTAATATTAGTGGCGCTTTGGGTGATTGTCTTTACTAT TATTCCTACTCCGACCAGCTTGTCAGAAGCTGCAACTGAAAAACAGAATAAAACTCATATCATGTGCCTTTGGACAGATC ACCAGACTCTTAAGGCCCTAACCCTGATGACCTTTGACTCTAACACAGGTAAAATTAACATTCTTAGTCTCCCTGTTTTT GCTTCCTTATCAGGGAGCAATAATGAACCATCCACCATTGGTCTGGTATGGGAGGAAACAGGAAGGAATGGATTGAGGAA ACGATTAGAAGGTGTTCTGGGAATTAAAATTAATGGCTATATCTCCTTTGATCAGCCTGTTATTGAACAGGCCAGTGAAC TGGTCGGAACATTTAACGTTAATGGCCGAAAAACGACTCTGCTTTGTGCCTTTGAGGATACGCGAACCGAACGCCGTAAG GATGATCAGGATGTTCTTCGGGCCATGGCCGCCAATATTATTTCGCCTAACAAAATTAAAGTAGTTCCCCGTCTATTATG GATTTTTACCGCGGAGGTACATAGTGACATTCACCCCAATATGATGTTAAGGCTTTACAGGGTAATTAGTCACCAAGGGC CAGCCATTCTTACCAAAAAAGCGTTGTATGGGCAGGATTATTATTTAGACGGCTGTCGATACCGCTATGTAGAACCTGCC ACCTGGAAGAACATTATCAATGAAATAAGTGCTTGA
Upstream 100 bases:
>100_bases CATAAGCTATCAAACTTTGCTAGTTAATTTAGACAACCCCTAGGCTGATTCTTTTTTTAGAGCAGAATATTAACTTTTAT TTTTTTACATAATAACTACT
Downstream 100 bases:
>100_bases CCCACCGGGTTAAGCACTTATCTGTTTTAGGACATTGCCATTAATAAGCCAAGTAATAAACTTAAAGTTCCCCCAGCCCA TAAGATTACCCACTTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKSLAVFSLKQLSILILVALWVIVFTIIPTPTSLSEAATEKQNKTHIMCLWTDHQTLKALTLMTFDSNTGKINILSLPVF ASLSGSNNEPSTIGLVWEETGRNGLRKRLEGVLGIKINGYISFDQPVIEQASELVGTFNVNGRKTTLLCAFEDTRTERRK DDQDVLRAMAANIISPNKIKVVPRLLWIFTAEVHSDIHPNMMLRLYRVISHQGPAILTKKALYGQDYYLDGCRYRYVEPA TWKNIINEISA
Sequences:
>Translated_251_residues MKSLAVFSLKQLSILILVALWVIVFTIIPTPTSLSEAATEKQNKTHIMCLWTDHQTLKALTLMTFDSNTGKINILSLPVF ASLSGSNNEPSTIGLVWEETGRNGLRKRLEGVLGIKINGYISFDQPVIEQASELVGTFNVNGRKTTLLCAFEDTRTERRK DDQDVLRAMAANIISPNKIKVVPRLLWIFTAEVHSDIHPNMMLRLYRVISHQGPAILTKKALYGQDYYLDGCRYRYVEPA TWKNIINEISA >Mature_251_residues MKSLAVFSLKQLSILILVALWVIVFTIIPTPTSLSEAATEKQNKTHIMCLWTDHQTLKALTLMTFDSNTGKINILSLPVF ASLSGSNNEPSTIGLVWEETGRNGLRKRLEGVLGIKINGYISFDQPVIEQASELVGTFNVNGRKTTLLCAFEDTRTERRK DDQDVLRAMAANIISPNKIKVVPRLLWIFTAEVHSDIHPNMMLRLYRVISHQGPAILTKKALYGQDYYLDGCRYRYVEPA TWKNIINEISA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28279; Mature: 28279
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLAVFSLKQLSILILVALWVIVFTIIPTPTSLSEAATEKQNKTHIMCLWTDHQTLKAL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEECCHHEEEE TLMTFDSNTGKINILSLPVFASLSGSNNEPSTIGLVWEETGRNGLRKRLEGVLGIKINGY EEEEEECCCCEEEEEEECEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCEEEEEEEEE ISFDQPVIEQASELVGTFNVNGRKTTLLCAFEDTRTERRKDDQDVLRAMAANIISPNKIK EECCHHHHHHHHHHHEEEECCCCEEEEEEEECCCCHHHCCCHHHHHHHHHHHCCCCCHHH VVPRLLWIFTAEVHSDIHPNMMLRLYRVISHQGPAILTKKALYGQDYYLDGCRYRYVEPA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCEEECCCEEEEECCH TWKNIINEISA HHHHHHHHHCC >Mature Secondary Structure MKSLAVFSLKQLSILILVALWVIVFTIIPTPTSLSEAATEKQNKTHIMCLWTDHQTLKAL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEECCHHEEEE TLMTFDSNTGKINILSLPVFASLSGSNNEPSTIGLVWEETGRNGLRKRLEGVLGIKINGY EEEEEECCCCEEEEEEECEEEEECCCCCCCCEEEEEEECCCCHHHHHHHCCEEEEEEEEE ISFDQPVIEQASELVGTFNVNGRKTTLLCAFEDTRTERRKDDQDVLRAMAANIISPNKIK EECCHHHHHHHHHHHEEEECCCCEEEEEEEECCCCHHHCCCHHHHHHHHHHHCCCCCHHH VVPRLLWIFTAEVHSDIHPNMMLRLYRVISHQGPAILTKKALYGQDYYLDGCRYRYVEPA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCEEECCCEEEEECCH TWKNIINEISA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA