| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298621
Identifier: 134298621
GI number: 134298621
Start: 806675
End: 807397
Strand: Reverse
Name: 134298621
Synonym: Dred_0754
Alternate gene names: NA
Gene position: 807397-806675 (Counterclockwise)
Preceding gene: 134298622
Following gene: 134298618
Centisome position: 22.38
GC content: 42.32
Gene sequence:
>723_bases ATGTATAAAACAATATTTTTTGATCTTGATGGCACCCTGTTGCCTATGGACTTTAATTATTTTTCAACTAATTATTTTGG TCGGTTGACAAAGGCCTGCTCCCATGTGTTAGATGCAAATACCTTTCCCAAACATTTATGGGCTTCTACCGAGGCTATGA TCCGTGACAACTGTGCTGAAAAGACAAATCAAGAAGTTTTCATGGAGGATTTTATACCAAGATTTAACCTTCCAGCAGAC CAGCTTATGCCTTTGTTTGACCAGTTTTACGCCACAGAGTTTCCAGAGCTTATAAGTTGCACCAGTCCTACCCCCCTTGC CCGGAAAATTTGTCAAGAGTTGGTGGAAAAGGGATACCAGTTGGTATTAGCCACAAACCCGATTTTCCCCGATGCTGCCA CTGCCCACCGGATGCGTTGGGCGGGCATTGATGATATTCCCTGGGCTTTAGTAACCACCTATGAACACTGCCACTTCTGT AAACCCAACCCTAATTATTATCACGAGATTCTACAAAGGGTCGGTGCCAAAGCAGAAGAAACCCTTATGGTAGGGAATGA TACCCACGAAGATTTAGTGGCAAGAAAGCTGGGGATTAAAACCTATCTGGTTAAGGATAACCTCATTGACCATGGTGAGA AGGATTATGAGACAGATTTTGAAGGACGTCTGGAAGACTTTTTGAATTTCGCTAGACAGTTACCAAAATTAAAACAACCA TAA
Upstream 100 bases:
>100_bases ATCATCAAAAACATGCTAACCATAAAAAGAGTGGTTGCGGTTGCAGCAACCACGATGACAAAGGACATATACACTAAAGC AATTCCAAAGTGGAGGAAAT
Downstream 100 bases:
>100_bases ACTCTACCAAAGGGTGGGGTTTACGGTTGTTGAAATATTCTCCAACAAACTAAAACCTTTTCTTAAAATAAAAATAAGCC CCCAAATAGCCCAACAAGCC
Product: hydrolase
Products: NA
Alternate protein names: Hydrolase; Phosphatase; Haloacid Dehalogenase Domain-Containing Protein; HAD Superfamily Hydrolase; Haloacid Dehalogenase Domain Protein; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MYKTIFFDLDGTLLPMDFNYFSTNYFGRLTKACSHVLDANTFPKHLWASTEAMIRDNCAEKTNQEVFMEDFIPRFNLPAD QLMPLFDQFYATEFPELISCTSPTPLARKICQELVEKGYQLVLATNPIFPDAATAHRMRWAGIDDIPWALVTTYEHCHFC KPNPNYYHEILQRVGAKAEETLMVGNDTHEDLVARKLGIKTYLVKDNLIDHGEKDYETDFEGRLEDFLNFARQLPKLKQP
Sequences:
>Translated_240_residues MYKTIFFDLDGTLLPMDFNYFSTNYFGRLTKACSHVLDANTFPKHLWASTEAMIRDNCAEKTNQEVFMEDFIPRFNLPAD QLMPLFDQFYATEFPELISCTSPTPLARKICQELVEKGYQLVLATNPIFPDAATAHRMRWAGIDDIPWALVTTYEHCHFC KPNPNYYHEILQRVGAKAEETLMVGNDTHEDLVARKLGIKTYLVKDNLIDHGEKDYETDFEGRLEDFLNFARQLPKLKQP >Mature_240_residues MYKTIFFDLDGTLLPMDFNYFSTNYFGRLTKACSHVLDANTFPKHLWASTEAMIRDNCAEKTNQEVFMEDFIPRFNLPAD QLMPLFDQFYATEFPELISCTSPTPLARKICQELVEKGYQLVLATNPIFPDAATAHRMRWAGIDDIPWALVTTYEHCHFC KPNPNYYHEILQRVGAKAEETLMVGNDTHEDLVARKLGIKTYLVKDNLIDHGEKDYETDFEGRLEDFLNFARQLPKLKQP
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27833; Mature: 27833
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKTIFFDLDGTLLPMDFNYFSTNYFGRLTKACSHVLDANTFPKHLWASTEAMIRDNCAE CCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KTNQEVFMEDFIPRFNLPADQLMPLFDQFYATEFPELISCTSPTPLARKICQELVEKGYQ HCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCE LVLATNPIFPDAATAHRMRWAGIDDIPWALVTTYEHCHFCKPNPNYYHEILQRVGAKAEE EEEECCCCCCCCHHHHHHEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHH TLMVGNDTHEDLVARKLGIKTYLVKDNLIDHGEKDYETDFEGRLEDFLNFARQLPKLKQP EEEECCCCHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYKTIFFDLDGTLLPMDFNYFSTNYFGRLTKACSHVLDANTFPKHLWASTEAMIRDNCAE CCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KTNQEVFMEDFIPRFNLPADQLMPLFDQFYATEFPELISCTSPTPLARKICQELVEKGYQ HCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCE LVLATNPIFPDAATAHRMRWAGIDDIPWALVTTYEHCHFCKPNPNYYHEILQRVGAKAEE EEEECCCCCCCCHHHHHHEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHH TLMVGNDTHEDLVARKLGIKTYLVKDNLIDHGEKDYETDFEGRLEDFLNFARQLPKLKQP EEEECCCCHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA