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The map label for this gene is ywhA [H]

Identifier: 134298615

GI number: 134298615

Start: 800544

End: 800981

Strand: Reverse

Name: ywhA [H]

Synonym: Dred_0747

Alternate gene names: 134298615

Gene position: 800981-800544 (Counterclockwise)

Preceding gene: 134298618

Following gene: 134298614

Centisome position: 22.2

GC content: 31.51

Gene sequence:

>438_bases
TTGGATAAGAGAAAAAAAATAATAGCAATTGATATGTTATTCCATGATTTAGTTAAAAACAGCAGTTGTCAACTAAAGGA
GCTTTTAAAGGATTTAATAACTCCAACTCAATTTTTTTTACTAAAAATTATTGCATCACAAGAAACTTGTAAAGCAGCAG
ATATTGCTCATATCTTTGACATCACTCCGGCTGCTGCTACGACTATAATTGATAGACTGTATAAAAATGGATTGATTGAG
AGGAATAGATCTGAGAAGGATCGACGAATAGTATGGCTTAAACTAACTGAGAATGGCAGACAATTGCTATCCGATATTGA
GGCTATGAGAATTCAAATGTTGGTAAAACAATTTGCTAATATTACTGATGGTGAAATGCAAACGTTATATGAAGTCTTAA
AAAAAGTATTAGATAAGGACTTAGTCGATCCTGATTAA

Upstream 100 bases:

>100_bases
ACAACACCCCCTGAAACATTAACCTCATTAACTATTAATTGACATAATTATTAGCCAAGTTTATAATTCTGTTTAAGAAT
GTAAAAGGAGCAGAAATACC

Downstream 100 bases:

>100_bases
AGGGACTAAACAAAAAAACTTGCTAAAGGAGCATATCAAATGGAATTTGCTGAAACTTTTTTAAATTTAGTAATTATTTA
CTTTATCGTAACCAGTATCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDKRKKIIAIDMLFHDLVKNSSCQLKELLKDLITPTQFFLLKIIASQETCKAADIAHIFDITPAAATTIIDRLYKNGLIE
RNRSEKDRRIVWLKLTENGRQLLSDIEAMRIQMLVKQFANITDGEMQTLYEVLKKVLDKDLVDPD

Sequences:

>Translated_145_residues
MDKRKKIIAIDMLFHDLVKNSSCQLKELLKDLITPTQFFLLKIIASQETCKAADIAHIFDITPAAATTIIDRLYKNGLIE
RNRSEKDRRIVWLKLTENGRQLLSDIEAMRIQMLVKQFANITDGEMQTLYEVLKKVLDKDLVDPD
>Mature_145_residues
MDKRKKIIAIDMLFHDLVKNSSCQLKELLKDLITPTQFFLLKIIASQETCKAADIAHIFDITPAAATTIIDRLYKNGLIE
RNRSEKDRRIVWLKLTENGRQLLSDIEAMRIQMLVKQFANITDGEMQTLYEVLKKVLDKDLVDPD

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16761; Mature: 16761

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRKKIIAIDMLFHDLVKNSSCQLKELLKDLITPTQFFLLKIIASQETCKAADIAHIFD
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ITPAAATTIIDRLYKNGLIERNRSEKDRRIVWLKLTENGRQLLSDIEAMRIQMLVKQFAN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
ITDGEMQTLYEVLKKVLDKDLVDPD
CCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDKRKKIIAIDMLFHDLVKNSSCQLKELLKDLITPTQFFLLKIIASQETCKAADIAHIFD
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH
ITPAAATTIIDRLYKNGLIERNRSEKDRRIVWLKLTENGRQLLSDIEAMRIQMLVKQFAN
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
ITDGEMQTLYEVLKKVLDKDLVDPD
CCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]