| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is artQ [H]
Identifier: 134298610
GI number: 134298610
Start: 795663
End: 796331
Strand: Reverse
Name: artQ [H]
Synonym: Dred_0742
Alternate gene names: 134298610
Gene position: 796331-795663 (Counterclockwise)
Preceding gene: 134298611
Following gene: 134298609
Centisome position: 22.07
GC content: 39.76
Gene sequence:
>669_bases ATGACAGACATATATGGAATATTCACAGAGAATTTTCTTGCCTTTATGGAAGCAACTATCGTTACACTGAAATTAACTTC TGTTTCGCTGTTACTTGCCATGATCATCGGCCTTGTATTTGCTTTTTTTAAAATTTCCAGAAATTATTTTTTACAAAACA TCGCTAATCTATATATTACCCTAGTTCGTGGTACACCTTTGGTCGTTCAGCTAATGTTTCTCTACTTTGGTATCATCAAA CTGGTTGTATTACCGGCCTTTTGGGCAGGATCTTTGGCCCTGGCCATCCATGCGGGGGCCTATATTGCGGAAATATTTCG CGGGGCCATTCAGTCAATTAATCAAGGTCAAATGGAAGCAGCCCGCTCCCTAGGCATGAGCTACCCCTTATCAATGCGCC GTATTATCTTACCCCAGGCCTTTCGCAGGGCCATTCCACCCTTAGGCAATCAATTTATTATTGGATTAAAGGATTCTTCT CTGGTGGCCTATTTAGGTGTCCCGGAAATATATGGTACAGCACTGTATGCCCAGGCTGAAAATTTTCAGCCCTTTGAAAC TTATTTAGTAGCTGGTCTTTATTATTTAGTTCTAGTAATTATTTTTAGCTTCTTAGTTAATAAATTAGAAGCAAAATTAA ATGTGGAGCAGAATGGAGGTAATGCCTAG
Upstream 100 bases:
>100_bases AATAAGTAATAAGTGGTTTGGTCGGAACATTTTAGGTGACTAGTATAGTTGGAGTTGGGTGCAACTTCTTGCACCCAACC ACAGCTAAAGAGGTGAATGA
Downstream 100 bases:
>100_bases TGATTAAAATTAAAAACCTCCACAAACACTTTGGGTCCCTTCATGTTTTAAAAGGAATTGACCTAAAAGTAAATAACAGT GAAGTAGTTGTTCTAATTGG
Product: polar amino acid ABC transporter, inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTDIYGIFTENFLAFMEATIVTLKLTSVSLLLAMIIGLVFAFFKISRNYFLQNIANLYITLVRGTPLVVQLMFLYFGIIK LVVLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEAARSLGMSYPLSMRRIILPQAFRRAIPPLGNQFIIGLKDSS LVAYLGVPEIYGTALYAQAENFQPFETYLVAGLYYLVLVIIFSFLVNKLEAKLNVEQNGGNA
Sequences:
>Translated_222_residues MTDIYGIFTENFLAFMEATIVTLKLTSVSLLLAMIIGLVFAFFKISRNYFLQNIANLYITLVRGTPLVVQLMFLYFGIIK LVVLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEAARSLGMSYPLSMRRIILPQAFRRAIPPLGNQFIIGLKDSS LVAYLGVPEIYGTALYAQAENFQPFETYLVAGLYYLVLVIIFSFLVNKLEAKLNVEQNGGNA >Mature_221_residues TDIYGIFTENFLAFMEATIVTLKLTSVSLLLAMIIGLVFAFFKISRNYFLQNIANLYITLVRGTPLVVQLMFLYFGIIKL VVLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEAARSLGMSYPLSMRRIILPQAFRRAIPPLGNQFIIGLKDSSL VAYLGVPEIYGTALYAQAENFQPFETYLVAGLYYLVLVIIFSFLVNKLEAKLNVEQNGGNA
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=37.8109452736318, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=36.4532019704434, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI1788646, Length=212, Percent_Identity=31.1320754716981, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1788645, Length=198, Percent_Identity=34.8484848484849, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI48994930, Length=202, Percent_Identity=32.6732673267327, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=31.1320754716981, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787087, Length=228, Percent_Identity=24.1228070175439, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787086, Length=211, Percent_Identity=30.3317535545024, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=25.9259259259259, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI87082239, Length=211, Percent_Identity=28.436018957346, Blast_Score=75, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24642; Mature: 24510
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIYGIFTENFLAFMEATIVTLKLTSVSLLLAMIIGLVFAFFKISRNYFLQNIANLYIT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRGTPLVVQLMFLYFGIIKLVVLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ARSLGMSYPLSMRRIILPQAFRRAIPPLGNQFIIGLKDSSLVAYLGVPEIYGTALYAQAE HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHCCC NFQPFETYLVAGLYYLVLVIIFSFLVNKLEAKLNVEQNGGNA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure TDIYGIFTENFLAFMEATIVTLKLTSVSLLLAMIIGLVFAFFKISRNYFLQNIANLYIT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRGTPLVVQLMFLYFGIIKLVVLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEA HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ARSLGMSYPLSMRRIILPQAFRRAIPPLGNQFIIGLKDSSLVAYLGVPEIYGTALYAQAE HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHCCC NFQPFETYLVAGLYYLVLVIIFSFLVNKLEAKLNVEQNGGNA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]