Click here to switch to the map view.

The map label for this gene is yfcE [H]

Identifier: 134298606

GI number: 134298606

Start: 791842

End: 792387

Strand: Reverse

Name: yfcE [H]

Synonym: Dred_0738

Alternate gene names: 134298606

Gene position: 792387-791842 (Counterclockwise)

Preceding gene: 134298607

Following gene: 134298598

Centisome position: 21.96

GC content: 39.93

Gene sequence:

>546_bases
ATGAGAATTGGTATTATCAGTGACACACATGGTAGTTTGTTCTATTTTAAAAAGGCTCTGAATACCTTAGGGGGATGCGA
TTATATCATCCACGGTGGAGATGTTCTTTATCATGGGCCCAGAAACCCTTTACCCGAAGGCTATTCCCCCAAGGAACTGG
CTGAAAAAATAAATGGTATGAAAAATATTATTATAGCCCGGGGTAACTGTGATGCTGATGTGGACCAAATGGTTTTGCAG
CATCCTATCCAAAGCCCCTATGTATTTCTGCAATTAGGCGGTCTTAAAATACTGGTTTCCCACGGCTATACCAGAGATAA
AAAGGAGTACATAAAAATGGCCAGGGATTATGGCGCAGATTTGTTTATTTACGGTCATACCCATGTGAAAGAACTCAACC
AGGATGAAAATTTAATTGTTTTAAACCCTGGCAGTACCGCTCTGCCTAAGGACGGCATCCATTCAGTTGCAGTCATTGAT
GATGGTAATATTCAACTCATCAATATGGAAAATCAAGAGGTTATCAAGGAGTTGGTTGTAAAATAA

Upstream 100 bases:

>100_bases
GTAGCATTCCTTTTCTCCCTTTGCGTAGCATCCTGTAAAAAAATGTTTTAGAATATAATATAATTATTGAAAAACATTGC
TATAACAGGGAGTGAATTCG

Downstream 100 bases:

>100_bases
TTAGAAAAACTTGGCTTCGCCAAGTCTTTAGACGTCGGCGGAGCCTTAGTTTGCCCTTATGCATATCGGAAAGTTTTATA
CTTTCTGATATGCTAAAAAG

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRIGIISDTHGSLFYFKKALNTLGGCDYIIHGGDVLYHGPRNPLPEGYSPKELAEKINGMKNIIIARGNCDADVDQMVLQ
HPIQSPYVFLQLGGLKILVSHGYTRDKKEYIKMARDYGADLFIYGHTHVKELNQDENLIVLNPGSTALPKDGIHSVAVID
DGNIQLINMENQEVIKELVVK

Sequences:

>Translated_181_residues
MRIGIISDTHGSLFYFKKALNTLGGCDYIIHGGDVLYHGPRNPLPEGYSPKELAEKINGMKNIIIARGNCDADVDQMVLQ
HPIQSPYVFLQLGGLKILVSHGYTRDKKEYIKMARDYGADLFIYGHTHVKELNQDENLIVLNPGSTALPKDGIHSVAVID
DGNIQLINMENQEVIKELVVK
>Mature_181_residues
MRIGIISDTHGSLFYFKKALNTLGGCDYIIHGGDVLYHGPRNPLPEGYSPKELAEKINGMKNIIIARGNCDADVDQMVLQ
HPIQSPYVFLQLGGLKILVSHGYTRDKKEYIKMARDYGADLFIYGHTHVKELNQDENLIVLNPGSTALPKDGIHSVAVID
DGNIQLINMENQEVIKELVVK

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=184, Percent_Identity=34.7826086956522, Blast_Score=123, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 20157; Mature: 20157

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGIISDTHGSLFYFKKALNTLGGCDYIIHGGDVLYHGPRNPLPEGYSPKELAEKINGM
CEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHCCC
KNIIIARGNCDADVDQMVLQHPIQSPYVFLQLGGLKILVSHGYTRDKKEYIKMARDYGAD
EEEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCE
LFIYGHTHVKELNQDENLIVLNPGSTALPKDGIHSVAVIDDGNIQLINMENQEVIKELVV
EEEEECHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHC
K
C
>Mature Secondary Structure
MRIGIISDTHGSLFYFKKALNTLGGCDYIIHGGDVLYHGPRNPLPEGYSPKELAEKINGM
CEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHCCC
KNIIIARGNCDADVDQMVLQHPIQSPYVFLQLGGLKILVSHGYTRDKKEYIKMARDYGAD
EEEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCE
LFIYGHTHVKELNQDENLIVLNPGSTALPKDGIHSVAVIDDGNIQLINMENQEVIKELVV
EEEEECHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]