| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298436
Identifier: 134298436
GI number: 134298436
Start: 604195
End: 604686
Strand: Reverse
Name: 134298436
Synonym: Dred_0563
Alternate gene names: NA
Gene position: 604686-604195 (Counterclockwise)
Preceding gene: 134298451
Following gene: 134298435
Centisome position: 16.76
GC content: 44.31
Gene sequence:
>492_bases ATGGCCCACCAGCCAGTTCCCTCTTCCCAAAATCAACACATAATGATTTTAATAGAAGAACACTTGACTGTCGAGACCTA TCTTCAGTTATTTGCTAATGGTTGCCCGGAACACCTCCGTCCCCAAGTCTGTCCCCACTGCTTAATTCAAGTAATGTTAC ATCGGCATGGTAAATACAACAGACATGCCTATACTCCGGAGGATCAGTCTCATATTCCTATCTATCGATTTATCTGCCCC AATCCCAATTGTAGAAAAACCACTGCCCTACTTCCGGCTTTTTTAAAAGAACATCACCCAATATCTTTTGATATTCAGGA GAAGGTGATACGCCAGCAAGCAAAAGGTAAGACGTTGGTTCAATTGTCAGGGGAACTGCTGCGCCACTTAGGTGAAGAGA CCCCATTCTCCATTACAAAAGCCAAGCGATTATTTGATGAGGCTTTGATGGCCCGGACGGCTCAAGGGGGTAAAGAACTA GTGAGAAATTAG
Upstream 100 bases:
>100_bases TTGCCAAGAGTGGCGGTTACCCTGGATAATGATTAGTGTGTGCGAACTAATGGCACATGCCAATCAATCAGGAGGAAAGA AAATAAGAAGAGGGAACCAT
Downstream 100 bases:
>100_bases CCGTCAAATTAGGTGATTAGCTACAGTAGCTTTTGCAAAGCCTCTTTATGAGTGGTACTTTCTAAGGTTTGTAATATATC CTTTTTTTGTAAGTACCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAHQPVPSSQNQHIMILIEEHLTVETYLQLFANGCPEHLRPQVCPHCLIQVMLHRHGKYNRHAYTPEDQSHIPIYRFICP NPNCRKTTALLPAFLKEHHPISFDIQEKVIRQQAKGKTLVQLSGELLRHLGEETPFSITKAKRLFDEALMARTAQGGKEL VRN
Sequences:
>Translated_163_residues MAHQPVPSSQNQHIMILIEEHLTVETYLQLFANGCPEHLRPQVCPHCLIQVMLHRHGKYNRHAYTPEDQSHIPIYRFICP NPNCRKTTALLPAFLKEHHPISFDIQEKVIRQQAKGKTLVQLSGELLRHLGEETPFSITKAKRLFDEALMARTAQGGKEL VRN >Mature_162_residues AHQPVPSSQNQHIMILIEEHLTVETYLQLFANGCPEHLRPQVCPHCLIQVMLHRHGKYNRHAYTPEDQSHIPIYRFICPN PNCRKTTALLPAFLKEHHPISFDIQEKVIRQQAKGKTLVQLSGELLRHLGEETPFSITKAKRLFDEALMARTAQGGKELV RN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18756; Mature: 18625
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHQPVPSSQNQHIMILIEEHLTVETYLQLFANGCPEHLRPQVCPHCLIQVMLHRHGKYN CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHCCHHCCHHHHHHHHHHHCCCCC RHAYTPEDQSHIPIYRFICPNPNCRKTTALLPAFLKEHHPISFDIQEKVIRQQAKGKTLV CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH QLSGELLRHLGEETPFSITKAKRLFDEALMARTAQGGKELVRN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure AHQPVPSSQNQHIMILIEEHLTVETYLQLFANGCPEHLRPQVCPHCLIQVMLHRHGKYN CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHCCHHCCHHHHHHHHHHHCCCCC RHAYTPEDQSHIPIYRFICPNPNCRKTTALLPAFLKEHHPISFDIQEKVIRQQAKGKTLV CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH QLSGELLRHLGEETPFSITKAKRLFDEALMARTAQGGKELVRN HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA