Click here to switch to the map view.

The map label for this gene is rnfC [C]

Identifier: 134298341

GI number: 134298341

Start: 508722

End: 508910

Strand: Reverse

Name: rnfC [C]

Synonym: Dred_0466

Alternate gene names: 134298341

Gene position: 508910-508722 (Counterclockwise)

Preceding gene: 134298343

Following gene: 134298340

Centisome position: 14.1

GC content: 43.39

Gene sequence:

>189_bases
ATGTACATGGTATCTATTAATCAAGACAACTGCGTTGGTTGTGCTGCTTGCGTTGACGCTTGCCCTGCGAAAATCTTAGG
TATGGAAAATGACAAATGCGAAATTACTGGTGATGCAGCTGAGTGTCTGGGCTGTGAAACCTGTATTGGCATTTGTCCCA
ACGAATGCTTCTCCATTATGGAACTGTAA

Upstream 100 bases:

>100_bases
TCAATGATTGAACTGGTTGATTAATTCATTTATAATGTTTTTGTGTCCGAAACAATGTAACAATAAAATGAGCAATATTC
TAACCAAGGAGGAATTGCTA

Downstream 100 bases:

>100_bases
TAATAACTAATGCAACAGGGGACGTCATCTTGACGTCCCCTGTTTTACATTTTCACTTTGAAGTTTTAAAAATAATAAGC
TTTAACCTAAGGGGTGATAT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MYMVSINQDNCVGCAACVDACPAKILGMENDKCEITGDAAECLGCETCIGICPNECFSIMEL

Sequences:

>Translated_62_residues
MYMVSINQDNCVGCAACVDACPAKILGMENDKCEITGDAAECLGCETCIGICPNECFSIMEL
>Mature_62_residues
MYMVSINQDNCVGCAACVDACPAKILGMENDKCEITGDAAECLGCETCIGICPNECFSIMEL

Specific function: May Be Part Of A Membrane Complex Involved In Electron Transport (By Similarity). [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Inner membrane-associated (By similarity) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6559; Mature: 6559

Theoretical pI: Translated: 3.54; Mature: 3.54

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

16.1 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
22.6 %Cys+Met (Translated Protein)
16.1 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
22.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMVSINQDNCVGCAACVDACPAKILGMENDKCEITGDAAECLGCETCIGICPNECFSIM
CEEEECCCCCCCHHHHHHHHCCHHHCCCCCCCEEEECCHHHHCCCHHHHCCCCHHHHHHH
EL
CC
>Mature Secondary Structure
MYMVSINQDNCVGCAACVDACPAKILGMENDKCEITGDAAECLGCETCIGICPNECFSIM
CEEEECCCCCCCHHHHHHHHCCHHHCCCCCCCEEEECCHHHHCCCHHHHCCCCHHHHHHH
EL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA