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The map label for this gene is motB [H]

Identifier: 134298231

GI number: 134298231

Start: 373904

End: 374614

Strand: Reverse

Name: motB [H]

Synonym: Dred_0354

Alternate gene names: 134298231

Gene position: 374614-373904 (Counterclockwise)

Preceding gene: 134298232

Following gene: 134298227

Centisome position: 10.38

GC content: 42.76

Gene sequence:

>711_bases
ATGGCAAAGCACAGAGAGCAGCATGAGGAACATATTGATGAATCCTGGCTAATCCCCTATGCTGATTTGTTAACCCTTTT
ATTAGCTTTGTTTATAGTCCTTTTTGCTTCCAGCACCATTGATAATCAAAAATTTAACGCCATGAAGGAATCACTGAATG
CTGCTTTAAACAGTGGGGCAGGCATCATGGAATCCAAATCCTTGTCTGATCAGTTGATTGATAAAACAGAGGTGAAAACC
GATACTGTCGTGGAACTGCAGGAATTAAAGAAGCAGTTAGATCAGTATATAAAGGAAAATAACATGACAACAGAGGTGGA
AACTAATATTATCAACAACCACCTAACTCTCACCATCCGGGACCGCGCTTTGTTTGATTCCGGCAGCGCCGTTGTAAAAC
CCCAATCCAGAAAGATTATTAAAGCAATGGGTAGTATCCTTCAACAGTACCCCAAATTTGAGGTGCTGGTAGCCGGTCAT
ACAGATAATCAGCCCATTTACAACAACACCTTTGAATCCAACTGGGATCTTAGTTCCAAACGCGCCCTAAACTGCATGAA
GATCATGCTGACCAATAAAAACCTAGACCCACGCCGCTTGGTTGCCATCGGTTACGGTGAATATCGACCCATTGCTGAGA
ACACAACCACCGAGGGCCGTGCCAAAAACCGCCGGGTAGAAGTTATTATCAATCAAAAGGTCATTCAATAA

Upstream 100 bases:

>100_bases
GCTATTCAAACCGGGCGCTCACCCATAGCCATAGAACAACAACTTTTAGTATACCTGTCTCCATCAGAAAGAAGTAGCTC
AAAGGAGGAAGCAGAAAACG

Downstream 100 bases:

>100_bases
GACCTTTAACAAAGGCCTCCACAACTCTGTTAAATTCCCTCGGACGCTCCATCATCATCATATGCCCAGCTTTGGGTATA
ACAGATATCTGGGCGCCAGG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAKHREQHEEHIDESWLIPYADLLTLLLALFIVLFASSTIDNQKFNAMKESLNAALNSGAGIMESKSLSDQLIDKTEVKT
DTVVELQELKKQLDQYIKENNMTTEVETNIINNHLTLTIRDRALFDSGSAVVKPQSRKIIKAMGSILQQYPKFEVLVAGH
TDNQPIYNNTFESNWDLSSKRALNCMKIMLTNKNLDPRRLVAIGYGEYRPIAENTTTEGRAKNRRVEVIINQKVIQ

Sequences:

>Translated_236_residues
MAKHREQHEEHIDESWLIPYADLLTLLLALFIVLFASSTIDNQKFNAMKESLNAALNSGAGIMESKSLSDQLIDKTEVKT
DTVVELQELKKQLDQYIKENNMTTEVETNIINNHLTLTIRDRALFDSGSAVVKPQSRKIIKAMGSILQQYPKFEVLVAGH
TDNQPIYNNTFESNWDLSSKRALNCMKIMLTNKNLDPRRLVAIGYGEYRPIAENTTTEGRAKNRRVEVIINQKVIQ
>Mature_235_residues
AKHREQHEEHIDESWLIPYADLLTLLLALFIVLFASSTIDNQKFNAMKESLNAALNSGAGIMESKSLSDQLIDKTEVKTD
TVVELQELKKQLDQYIKENNMTTEVETNIINNHLTLTIRDRALFDSGSAVVKPQSRKIIKAMGSILQQYPKFEVLVAGHT
DNQPIYNNTFESNWDLSSKRALNCMKIMLTNKNLDPRRLVAIGYGEYRPIAENTTTEGRAKNRRVEVIINQKVIQ

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=148, Percent_Identity=30.4054054054054, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788198, Length=244, Percent_Identity=26.2295081967213, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 26877; Mature: 26746

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHREQHEEHIDESWLIPYADLLTLLLALFIVLFASSTIDNQKFNAMKESLNAALNSGA
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
GIMESKSLSDQLIDKTEVKTDTVVELQELKKQLDQYIKENNMTTEVETNIINNHLTLTIR
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHEEECCEEEEEEE
DRALFDSGSAVVKPQSRKIIKAMGSILQQYPKFEVLVAGHTDNQPIYNNTFESNWDLSSK
CCEEECCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHH
RALNCMKIMLTNKNLDPRRLVAIGYGEYRPIAENTTTEGRAKNRRVEVIINQKVIQ
HHHHHHEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
AKHREQHEEHIDESWLIPYADLLTLLLALFIVLFASSTIDNQKFNAMKESLNAALNSGA
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
GIMESKSLSDQLIDKTEVKTDTVVELQELKKQLDQYIKENNMTTEVETNIINNHLTLTIR
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHEEECCEEEEEEE
DRALFDSGSAVVKPQSRKIIKAMGSILQQYPKFEVLVAGHTDNQPIYNNTFESNWDLSSK
CCEEECCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHH
RALNCMKIMLTNKNLDPRRLVAIGYGEYRPIAENTTTEGRAKNRRVEVIINQKVIQ
HHHHHHEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]