| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298168
Identifier: 134298168
GI number: 134298168
Start: 300964
End: 302193
Strand: Reverse
Name: 134298168
Synonym: Dred_0290
Alternate gene names: NA
Gene position: 302193-300964 (Counterclockwise)
Preceding gene: 134298169
Following gene: 134298146
Centisome position: 8.38
GC content: 42.03
Gene sequence:
>1230_bases ATGAAAAAAATTATTTTGTTTTGTTTATCTCTATTGCTCCTTGTGGACTTTTCCCAGGCAAAGGCCAATGGTAATTCAGA TAAAATTGACTTCTTTAAGGGAAAAGTCGCCGGCAAAGTGTTGTTTGTACCCTTGGATGAAAGGCCTGTCAGTTTAGATT ATGTGACCGAGACCATTGGTGGCACCGGGGTAGAGGTCATTACCCCGCCCAAGGAATTACTTCCCAATAAAAAAATACCC GCAAATACCGAAAAGCTTTGGCAGTGGGTATTTGAAAACAGTCCCCAGGTAGACTACCTGGTGCTTTCCAGCGATAACAT GGTTTATGGAGGGCTTATTCCTTCCCGTATACACTCCCTTGATATACAGACCCTGACCAACCGGGTTGCAAACTTCTCCC GAATCAAGAAGATCAATCCTAAAGTAAAGGTTTATATTTTTACAACCATTATGCGTTCACCCAGGGAAGGTGGTAATACC GAAGAACCAGATTACTACACTACCTACGGCAGTAAGCTATTTCAGTATAGCGCTTTATTAGACCGGGCTGATATGGGGAC ATTGACCATTGAGGAAAATAAGAGAATTACTCAACTGCAGGAAAGCATTCCTCAAACTATCCGTAGTGATTGGTTCAACC GTAGGGCTAGGAACCTTAATGTTACCCGCCAATTAATCAACCTCAATCAAAAGAATGTTATTGACTACATGGTCCTTACC CGGGATGATTGTGCGGTATATAGTGCCAGTCACAAGGATTTCCGTAAACTGCAAGAGGTCTTTAAGGGTATGCCCCAAAG CCAATTTATTACCTTTCCCGGGGCCGATAATACTCTAATGGCCCTACTGGAAAAAGAAAAACTACTACCCCATCTAACCG CTTATTCGGGATGGAATACCTGTGGTAACAGTATTGGCTATGCATTGGGTCAAGGTATGCTGGCTGATTATATGGATATT CCGTTTCAAAAAAAGTTCCTTATTACTAGATACTTAGACGACTGGGGCTATCAAGCAAACATTCGTCAGGCCATTGAAAG AGAACTACTTTTCCCCTTGGGTTATGACCGAAACAATTTGGGTCCATTGGAAGGTAAGGTAAAGAAAGAAATTAATAAGC GTTTACAGACCTTTGCCGATAATCATGCTTTTAAGGTAAAAGTGCTGGAGGCATCGCTGCCTTGGCATCGTACATTTAAT ATTAAGGTTGAGTTGGAACCGGTTAAGTAA
Upstream 100 bases:
>100_bases ACACATCCATTAGTACAAACGTTTTTTATAAATTGTTGTCTATCTATATAGGAATATTTTTACTGATGATATTAAAATTT CCACCTGGGAGGTATTAACC
Downstream 100 bases:
>100_bases AAAAACTTGGCTTATGCCATACCCTATAGGGCACGAAGCCTTTAGGCGAGGCGTAAGCCTTAGTTTGCCCCTATGCATAT CGGAAAGTTTTATACTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKKIILFCLSLLLLVDFSQAKANGNSDKIDFFKGKVAGKVLFVPLDERPVSLDYVTETIGGTGVEVITPPKELLPNKKIP ANTEKLWQWVFENSPQVDYLVLSSDNMVYGGLIPSRIHSLDIQTLTNRVANFSRIKKINPKVKVYIFTTIMRSPREGGNT EEPDYYTTYGSKLFQYSALLDRADMGTLTIEENKRITQLQESIPQTIRSDWFNRRARNLNVTRQLINLNQKNVIDYMVLT RDDCAVYSASHKDFRKLQEVFKGMPQSQFITFPGADNTLMALLEKEKLLPHLTAYSGWNTCGNSIGYALGQGMLADYMDI PFQKKFLITRYLDDWGYQANIRQAIERELLFPLGYDRNNLGPLEGKVKKEINKRLQTFADNHAFKVKVLEASLPWHRTFN IKVELEPVK
Sequences:
>Translated_409_residues MKKIILFCLSLLLLVDFSQAKANGNSDKIDFFKGKVAGKVLFVPLDERPVSLDYVTETIGGTGVEVITPPKELLPNKKIP ANTEKLWQWVFENSPQVDYLVLSSDNMVYGGLIPSRIHSLDIQTLTNRVANFSRIKKINPKVKVYIFTTIMRSPREGGNT EEPDYYTTYGSKLFQYSALLDRADMGTLTIEENKRITQLQESIPQTIRSDWFNRRARNLNVTRQLINLNQKNVIDYMVLT RDDCAVYSASHKDFRKLQEVFKGMPQSQFITFPGADNTLMALLEKEKLLPHLTAYSGWNTCGNSIGYALGQGMLADYMDI PFQKKFLITRYLDDWGYQANIRQAIERELLFPLGYDRNNLGPLEGKVKKEINKRLQTFADNHAFKVKVLEASLPWHRTFN IKVELEPVK >Mature_409_residues MKKIILFCLSLLLLVDFSQAKANGNSDKIDFFKGKVAGKVLFVPLDERPVSLDYVTETIGGTGVEVITPPKELLPNKKIP ANTEKLWQWVFENSPQVDYLVLSSDNMVYGGLIPSRIHSLDIQTLTNRVANFSRIKKINPKVKVYIFTTIMRSPREGGNT EEPDYYTTYGSKLFQYSALLDRADMGTLTIEENKRITQLQESIPQTIRSDWFNRRARNLNVTRQLINLNQKNVIDYMVLT RDDCAVYSASHKDFRKLQEVFKGMPQSQFITFPGADNTLMALLEKEKLLPHLTAYSGWNTCGNSIGYALGQGMLADYMDI PFQKKFLITRYLDDWGYQANIRQAIERELLFPLGYDRNNLGPLEGKVKKEINKRLQTFADNHAFKVKVLEASLPWHRTFN IKVELEPVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46908; Mature: 46908
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILFCLSLLLLVDFSQAKANGNSDKIDFFKGKVAGKVLFVPLDERPVSLDYVTETIG CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHCC GTGVEVITPPKELLPNKKIPANTEKLWQWVFENSPQVDYLVLSSDNMVYGGLIPSRIHSL CCCEEEECCCHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCEEECCCCHHHHHHH DIQTLTNRVANFSRIKKINPKVKVYIFTTIMRSPREGGNTEEPDYYTTYGSKLFQYSALL HHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHH DRADMGTLTIEENKRITQLQESIPQTIRSDWFNRRARNLNVTRQLINLNQKNVIDYMVLT HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEE RDDCAVYSASHKDFRKLQEVFKGMPQSQFITFPGADNTLMALLEKEKLLPHLTAYSGWNT CCCHHEEECCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCHHHHHCCCCHH CGNSIGYALGQGMLADYMDIPFQKKFLITRYLDDWGYQANIRQAIERELLFPLGYDRNNL HHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC GPLEGKVKKEINKRLQTFADNHAFKVKVLEASLPWHRTFNIKVELEPVK CCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEEEEECC >Mature Secondary Structure MKKIILFCLSLLLLVDFSQAKANGNSDKIDFFKGKVAGKVLFVPLDERPVSLDYVTETIG CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHCC GTGVEVITPPKELLPNKKIPANTEKLWQWVFENSPQVDYLVLSSDNMVYGGLIPSRIHSL CCCEEEECCCHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCEEECCCCHHHHHHH DIQTLTNRVANFSRIKKINPKVKVYIFTTIMRSPREGGNTEEPDYYTTYGSKLFQYSALL HHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHH DRADMGTLTIEENKRITQLQESIPQTIRSDWFNRRARNLNVTRQLINLNQKNVIDYMVLT HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEEE RDDCAVYSASHKDFRKLQEVFKGMPQSQFITFPGADNTLMALLEKEKLLPHLTAYSGWNT CCCHHEEECCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHCHHHHHCCCCHH CGNSIGYALGQGMLADYMDIPFQKKFLITRYLDDWGYQANIRQAIERELLFPLGYDRNNL HHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC GPLEGKVKKEINKRLQTFADNHAFKVKVLEASLPWHRTFNIKVELEPVK CCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA