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The map label for this gene is rpsU

Identifier: 13357837

GI number: 13357837

Start: 312204

End: 312371

Strand: Direct

Name: rpsU

Synonym: UU277

Alternate gene names: 13357837

Gene position: 312204-312371 (Clockwise)

Preceding gene: 13357836

Following gene: 13357838

Centisome position: 41.53

GC content: 29.17

Gene sequence:

>168_bases
ATGTCAAGAGGTGTAAGCGTTGAAGGCGATTTAGAAAAGGCTCTTAAGAAATTTAAACGTATTTCTAATGAAACAAAAAA
AGATTCTAAACGTCACGAATATTATTTAAGTCCAAGAATTCGTCGTAAAGAAAAAATTAAAGAGGCTAATAAATATCGTA
GTTTCTAA

Upstream 100 bases:

>100_bases
TTTTTCTGAAATGATTTTATATTAAAGTTTTTAGAATTTAATGCTGGAAAAGGATTATAATTTTAAATAATCTATTTTTA
ACAGAAATGTGGGTGAATTT

Downstream 100 bases:

>100_bases
ATTAGAAACGCACATGAATCCAACCATTACTTGAATGTTTTGGTTGGTTTTTTCTTTAATATTAAGATTTTTCAGAAGTG
CTAGAATTATAAAAATGGTT

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MSRGVSVEGDLEKALKKFKRISNETKKDSKRHEYYLSPRIRRKEKIKEANKYRSF

Sequences:

>Translated_55_residues
MSRGVSVEGDLEKALKKFKRISNETKKDSKRHEYYLSPRIRRKEKIKEANKYRSF
>Mature_54_residues
SRGVSVEGDLEKALKKFKRISNETKKDSKRHEYYLSPRIRRKEKIKEANKYRSF

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS21_UREP2 (B1AIR7)

Other databases:

- EMBL:   CP000942
- RefSeq:   YP_001752361.1
- GeneID:   6155536
- GenomeReviews:   CP000942_GR
- KEGG:   upa:UPA3_0287
- HOGENOM:   HBG734404
- OMA:   FRSLASH
- ProtClustDB:   PRK00270
- BioCyc:   UPAR505682:UPA3_0287-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00358
- InterPro:   IPR001911
- TIGRFAMs:   TIGR00030

Pfam domain/function: PF01165 Ribosomal_S21

EC number: NA

Molecular weight: Translated: 6661; Mature: 6530

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: PS01181 RIBOSOMAL_S21

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGVSVEGDLEKALKKFKRISNETKKDSKRHEYYLSPRIRRKEKIKEANKYRSF
CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRGVSVEGDLEKALKKFKRISNETKKDSKRHEYYLSPRIRRKEKIKEANKYRSF
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA