| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357831
GI number: 13357831
Start: 306447
End: 307820
Strand: Direct
Name: Not Available
Synonym: UU271
Alternate gene names: NA
Gene position: 306447-307820 (Clockwise)
Preceding gene: 13357830
Following gene: 13357832
Centisome position: 40.77
GC content: 18.41
Gene sequence:
>1374_bases ATGTTTATGTTTGATCAAATCTTTAAAAAAAGGAAACGTCATTTAAACTTTCAAATTTTTATTTTCTTTTTTGTTTTAAT ATTAATTACTTTTTTGATTTTATGAATTATTTCAGGTAATGTTCAAACAATTATTGATTTTATTAAAAAAAAGATTTATG ATGCTAGTCCACAATTAAAATATTTAACAAATATTCAGATCAAACCTTTTAAAAATTTAGAAGAAATTTTTGATTTTATT ATTAAAAATAAGAATTTGATTAAAGATTTACAAAACGAACCTGAAATTTTAGATGTTATTAAAAACAATCCACAGATCTT AAAAACACTTAATGATAACCGCGAATTTTTAAAACAAATTGTTGAATATAAGCCATTTGCTGAAATTCTTAGCAAGCAAC CTGAAATTTTAAAATTTGTTCAAAATAATAAAGAATTAATTAAACAGATACAAAATTTACCTGAATTATTAGATTTAATT AAAAAACACCAAAATTTAATTGATCACTTAAAAACTAACGAAAAATATATAGAAGTTATTAAAGCTAATCCTCAAATGTT AAAAGATCTCTATCATGTAGATGATAATTTATTTAATATTATAAAGACAAGCTTAGAAAATGATAAAGAAAATAATATTT TAATGTTGGCTATTAAATATTCAGTATTAATTAATAATTTTACTAAGAATTTAACTTTACAAGAATGAAAGCAAATAATA GAATTTTATAAAACAGTTGATTTAAATAAATTTATAGTTGATGATAATTTGTTTAATATTATTAAAAATAATAATCAATT ATTTGAAGTTTTTTTAAATAATTATGACTACATAAAAAATCTTGAGGACAATCAAAAAATTATTGATATTATTCAACAAA ATCCTGATTTAATTGATGATTTTAAAAAGATTGATTTTGATCTTTTAACACAAAAAAGGAATTTTGTTCGTGCACTAATT AAAATAATTGATTATAAACAACCCAAAGAAATTCAATTCCTTAACAAAAAAGTTTTTTTAGATTTCTTTAAAAATAAATC TGAAATTACCAATGCTTTAAACATCACATCTTTAATTGGATTTGTATTGTTTATAGTAATTTATACAATTTTTATTTTTG CATCTTTTATTTCTCATATTCTAATGTTAAAACAAATTAAAGATTTTAATAAAATTTTTAAAGAAGCTAAATTAAAAAAA ATATATCTTATAAGCACTTTATTATTACAATTTTTATTTTTAATTTTATTCATTATTAATTTTATAGTATTAATTATTCT AGTTGTAGATTATAATAAATTGAAAGCAATAGTTTTAAATAGTGGTATAAAAAGAAAAGTGGAGGATAGTGATGCAAGAT TGCATTTTTTGTAA
Upstream 100 bases:
>100_bases CAATTCCCGCTATTGTTGCCTTAAAAAACAAATATTTATGTAAATTAGTTTAAAATTATAAAAATAATTTTTTACATTAT TATTTATTTATAGACAGGAG
Downstream 100 bases:
>100_bases AATTTTAAAAGGTGAAATTATTTCAAAAATAATAGATGAAAACGAATTTGCTATAGCAATTTTAGACATTCAACCTGCAA GTGATGGTCATATGTTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLILWIISGNVQTIIDFIKKKIYDASPQLKYLTNIQIKPFKNLEEIFDFI IKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIVEYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLI KKHQNLIDHLKTNEKYIEVIKANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQEWKQII EFYKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFKKIDFDLLTQKRNFVRALI KIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFVLFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKK IYLISTLLLQFLFLILFIINFIVLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL
Sequences:
>Translated_457_residues MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLIL*IISGNVQTIIDFIKKKIYDASPQLKYLTNIQIKPFKNLEEIFDFI IKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIVEYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLI KKHQNLIDHLKTNEKYIEVIKANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQE*KQII EFYKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFKKIDFDLLTQKRNFVRALI KIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFVLFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKK IYLISTLLLQFLFLILFIINFIVLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL >Mature_457_residues MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLIL*IISGNVQTIIDFIKKKIYDASPQLKYLTNIQIKPFKNLEEIFDFI IKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIVEYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLI KKHQNLIDHLKTNEKYIEVIKANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQE*KQII EFYKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFKKIDFDLLTQKRNFVRALI KIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFVLFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKK IYLISTLLLQFLFLILFIINFIVLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54254; Mature: 54254
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLILIISGNVQTIIDFIKKKIYDASPQLKY CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEH LTNIQIKPFKNLEEIFDFIIKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIV HHCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHH EYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLIKKHQNLIDHLKTNEKYIEVIK CCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQEKQIIEF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHH YKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFK HHHCCCCCEEECCHHHHHHHCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCCHHHHHH KIDFDLLTQKRNFVRALIKIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFV HCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH LFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKKIYLISTLLLQFLFLILFIINFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCEECC >Mature Secondary Structure MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLILIISGNVQTIIDFIKKKIYDASPQLKY CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEH LTNIQIKPFKNLEEIFDFIIKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIV HHCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHH EYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLIKKHQNLIDHLKTNEKYIEVIK CCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQEKQIIEF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHH YKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFK HHHCCCCCEEECCHHHHHHHCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCCHHHHHH KIDFDLLTQKRNFVRALIKIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFV HCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH LFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKKIYLISTLLLQFLFLILFIINFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA