Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357831

GI number: 13357831

Start: 306447

End: 307820

Strand: Direct

Name: Not Available

Synonym: UU271

Alternate gene names: NA

Gene position: 306447-307820 (Clockwise)

Preceding gene: 13357830

Following gene: 13357832

Centisome position: 40.77

GC content: 18.41

Gene sequence:

>1374_bases
ATGTTTATGTTTGATCAAATCTTTAAAAAAAGGAAACGTCATTTAAACTTTCAAATTTTTATTTTCTTTTTTGTTTTAAT
ATTAATTACTTTTTTGATTTTATGAATTATTTCAGGTAATGTTCAAACAATTATTGATTTTATTAAAAAAAAGATTTATG
ATGCTAGTCCACAATTAAAATATTTAACAAATATTCAGATCAAACCTTTTAAAAATTTAGAAGAAATTTTTGATTTTATT
ATTAAAAATAAGAATTTGATTAAAGATTTACAAAACGAACCTGAAATTTTAGATGTTATTAAAAACAATCCACAGATCTT
AAAAACACTTAATGATAACCGCGAATTTTTAAAACAAATTGTTGAATATAAGCCATTTGCTGAAATTCTTAGCAAGCAAC
CTGAAATTTTAAAATTTGTTCAAAATAATAAAGAATTAATTAAACAGATACAAAATTTACCTGAATTATTAGATTTAATT
AAAAAACACCAAAATTTAATTGATCACTTAAAAACTAACGAAAAATATATAGAAGTTATTAAAGCTAATCCTCAAATGTT
AAAAGATCTCTATCATGTAGATGATAATTTATTTAATATTATAAAGACAAGCTTAGAAAATGATAAAGAAAATAATATTT
TAATGTTGGCTATTAAATATTCAGTATTAATTAATAATTTTACTAAGAATTTAACTTTACAAGAATGAAAGCAAATAATA
GAATTTTATAAAACAGTTGATTTAAATAAATTTATAGTTGATGATAATTTGTTTAATATTATTAAAAATAATAATCAATT
ATTTGAAGTTTTTTTAAATAATTATGACTACATAAAAAATCTTGAGGACAATCAAAAAATTATTGATATTATTCAACAAA
ATCCTGATTTAATTGATGATTTTAAAAAGATTGATTTTGATCTTTTAACACAAAAAAGGAATTTTGTTCGTGCACTAATT
AAAATAATTGATTATAAACAACCCAAAGAAATTCAATTCCTTAACAAAAAAGTTTTTTTAGATTTCTTTAAAAATAAATC
TGAAATTACCAATGCTTTAAACATCACATCTTTAATTGGATTTGTATTGTTTATAGTAATTTATACAATTTTTATTTTTG
CATCTTTTATTTCTCATATTCTAATGTTAAAACAAATTAAAGATTTTAATAAAATTTTTAAAGAAGCTAAATTAAAAAAA
ATATATCTTATAAGCACTTTATTATTACAATTTTTATTTTTAATTTTATTCATTATTAATTTTATAGTATTAATTATTCT
AGTTGTAGATTATAATAAATTGAAAGCAATAGTTTTAAATAGTGGTATAAAAAGAAAAGTGGAGGATAGTGATGCAAGAT
TGCATTTTTTGTAA

Upstream 100 bases:

>100_bases
CAATTCCCGCTATTGTTGCCTTAAAAAACAAATATTTATGTAAATTAGTTTAAAATTATAAAAATAATTTTTTACATTAT
TATTTATTTATAGACAGGAG

Downstream 100 bases:

>100_bases
AATTTTAAAAGGTGAAATTATTTCAAAAATAATAGATGAAAACGAATTTGCTATAGCAATTTTAGACATTCAACCTGCAA
GTGATGGTCATATGTTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLILWIISGNVQTIIDFIKKKIYDASPQLKYLTNIQIKPFKNLEEIFDFI
IKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIVEYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLI
KKHQNLIDHLKTNEKYIEVIKANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQEWKQII
EFYKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFKKIDFDLLTQKRNFVRALI
KIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFVLFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKK
IYLISTLLLQFLFLILFIINFIVLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL

Sequences:

>Translated_457_residues
MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLIL*IISGNVQTIIDFIKKKIYDASPQLKYLTNIQIKPFKNLEEIFDFI
IKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIVEYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLI
KKHQNLIDHLKTNEKYIEVIKANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQE*KQII
EFYKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFKKIDFDLLTQKRNFVRALI
KIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFVLFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKK
IYLISTLLLQFLFLILFIINFIVLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL
>Mature_457_residues
MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLIL*IISGNVQTIIDFIKKKIYDASPQLKYLTNIQIKPFKNLEEIFDFI
IKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIVEYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLI
KKHQNLIDHLKTNEKYIEVIKANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQE*KQII
EFYKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFKKIDFDLLTQKRNFVRALI
KIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFVLFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKK
IYLISTLLLQFLFLILFIINFIVLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54254; Mature: 54254

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLILIISGNVQTIIDFIKKKIYDASPQLKY
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEH
LTNIQIKPFKNLEEIFDFIIKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIV
HHCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHH
EYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLIKKHQNLIDHLKTNEKYIEVIK
CCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQEKQIIEF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHH
YKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFK
HHHCCCCCEEECCHHHHHHHCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCCHHHHHH
KIDFDLLTQKRNFVRALIKIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFV
HCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKKIYLISTLLLQFLFLILFIINFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL
HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MFMFDQIFKKRKRHLNFQIFIFFFVLILITFLILIISGNVQTIIDFIKKKIYDASPQLKY
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEH
LTNIQIKPFKNLEEIFDFIIKNKNLIKDLQNEPEILDVIKNNPQILKTLNDNREFLKQIV
HHCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHH
EYKPFAEILSKQPEILKFVQNNKELIKQIQNLPELLDLIKKHQNLIDHLKTNEKYIEVIK
CCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ANPQMLKDLYHVDDNLFNIIKTSLENDKENNILMLAIKYSVLINNFTKNLTLQEKQIIEF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHH
YKTVDLNKFIVDDNLFNIIKNNNQLFEVFLNNYDYIKNLEDNQKIIDIIQQNPDLIDDFK
HHHCCCCCEEECCHHHHHHHCCCHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCCHHHHHH
KIDFDLLTQKRNFVRALIKIIDYKQPKEIQFLNKKVFLDFFKNKSEITNALNITSLIGFV
HCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LFIVIYTIFIFASFISHILMLKQIKDFNKIFKEAKLKKIYLISTLLLQFLFLILFIINFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIILVVDYNKLKAIVLNSGIKRKVEDSDARLHFL
HHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA