| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357759
GI number: 13357759
Start: 245847
End: 246503
Strand: Direct
Name: Not Available
Synonym: UU201
Alternate gene names: NA
Gene position: 245847-246503 (Clockwise)
Preceding gene: 13357758
Following gene: 13357760
Centisome position: 32.7
GC content: 22.98
Gene sequence:
>657_bases ATGGCTACTAATTATTTTTTAATGAAAGAATCACAATGTGATTTACTAAATGATTTTAAAAACTTTTTTCAAATGGTAAT TGATAATCAAAAACTAATTTGTGATTTATTAAAAAACGATCAATCATCATATAAAGAAACATATGAAAAAGCTTGTTTTT TAGAAAAAAAAGTTAATACAACATATGCTGATATGTTAGAAGAAATTATGTGAATTATTCAACGTGACCAACCACGTGCT AGTTATTTACGTTTTTTTATTGCAGGAATCAATTCTATTAAAGATTTAGAAAGAATTTCTGATCACTCTGAAATTATTTG TGAATACTTTTTAGAAACTGAATTTGATGAAGAACAAAAAAATTTTTTTTTAACTAGCTTTGAGATTTCTAATCAAATTC TTTCTGATTTATATGATTTTTTTGATAAAAATGAATTTAGTGTCAATACAATTGAACATATTAAAGATTTACGTTCTAAA TCAATTATGAAAATCAATAAAAATTTAATTCAGTCCTTACATGATCAATCAAAACTATTAGATGAAAACTCAAATTATAT TAAATTAATTTTAATGTATCGTCATATTGAACGAAATATTGAACATGGCATAAATATTGTGCAGAACTTTGGTAATGTGC ACATTACCAGTCGTTAA
Upstream 100 bases:
>100_bases CGGGAGAAACAAAAACTATTTTTATCCATCCTAAAAATAAAAGAACAAAAGATTATATTTCTGGAAAGATTGGTTAATAA AAAGAACTGGTGATATATTT
Downstream 100 bases:
>100_bases TAAATCATTAGCAAAAACTAGGCATTTACCTAGTTTTTTTATTTATATAAAAAATAAGTCTTCCAAAAATTTTACATAAA AAGTGAAAAAAATGGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: PhoU Family
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MATNYFLMKESQCDLLNDFKNFFQMVIDNQKLICDLLKNDQSSYKETYEKACFLEKKVNTTYADMLEEIMWIIQRDQPRA SYLRFFIAGINSIKDLERISDHSEIICEYFLETEFDEEQKNFFLTSFEISNQILSDLYDFFDKNEFSVNTIEHIKDLRSK SIMKINKNLIQSLHDQSKLLDENSNYIKLILMYRHIERNIEHGINIVQNFGNVHITSR
Sequences:
>Translated_218_residues MATNYFLMKESQCDLLNDFKNFFQMVIDNQKLICDLLKNDQSSYKETYEKACFLEKKVNTTYADMLEEIM*IIQRDQPRA SYLRFFIAGINSIKDLERISDHSEIICEYFLETEFDEEQKNFFLTSFEISNQILSDLYDFFDKNEFSVNTIEHIKDLRSK SIMKINKNLIQSLHDQSKLLDENSNYIKLILMYRHIERNIEHGINIVQNFGNVHITSR >Mature_217_residues ATNYFLMKESQCDLLNDFKNFFQMVIDNQKLICDLLKNDQSSYKETYEKACFLEKKVNTTYADMLEEIM*IIQRDQPRAS YLRFFIAGINSIKDLERISDHSEIICEYFLETEFDEEQKNFFLTSFEISNQILSDLYDFFDKNEFSVNTIEHIKDLRSKS IMKINKNLIQSLHDQSKLLDENSNYIKLILMYRHIERNIEHGINIVQNFGNVHITSR
Specific function: Unknown
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25892; Mature: 25761
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNYFLMKESQCDLLNDFKNFFQMVIDNQKLICDLLKNDQSSYKETYEKACFLEKKVNT CCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC TYADMLEEIMIIQRDQPRASYLRFFIAGINSIKDLERISDHSEIICEYFLETEFDEEQKN HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FFLTSFEISNQILSDLYDFFDKNEFSVNTIEHIKDLRSKSIMKINKNLIQSLHDQSKLLD EEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ENSNYIKLILMYRHIERNIEHGINIVQNFGNVHITSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure ATNYFLMKESQCDLLNDFKNFFQMVIDNQKLICDLLKNDQSSYKETYEKACFLEKKVNT CCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC TYADMLEEIMIIQRDQPRASYLRFFIAGINSIKDLERISDHSEIICEYFLETEFDEEQKN HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FFLTSFEISNQILSDLYDFFDKNEFSVNTIEHIKDLRSKSIMKINKNLIQSLHDQSKLLD EEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ENSNYIKLILMYRHIERNIEHGINIVQNFGNVHITSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA