Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357736

GI number: 13357736

Start: 217298

End: 217678

Strand: Direct

Name: Not Available

Synonym: UU178

Alternate gene names: NA

Gene position: 217298-217678 (Clockwise)

Preceding gene: 13357735

Following gene: 13357737

Centisome position: 28.91

GC content: 19.69

Gene sequence:

>381_bases
ATGCAAAATTTAAATAATAAGCAAAAAACATTAATTATTTTTTTAGGTATTATTACCTTTGGAATTTTTATTATTTACTT
TTTTACAAAAGCTAAAAAAGTATCTCAAATTAGAAACACTCATTTAATAGTATCTTCAAATATTCCTTTTAGTTTAAATG
ATTTTTATAATTGTATTGGTTCAAAAAATAATTTAGTTAACGTTGATGCGACAATTAATACATTAAAAATTGAATTAAAA
GAAATTAACGCATTGAATAATGAAAAATTAAAGGTTTTAGGTGCAAAAGGGATTATGTGCAATCAAACAAAAATTTCTAT
TATTTTTGGTGATTTTTGTTTGGAACTTAAAGAATTAATTAAAAAAGATTTATTTTCATAG

Upstream 100 bases:

>100_bases
AAGTAGAAACAATCCAAGCTTCATCAAAAATTCATGGTTTAAATAATTTTAAGAAATACATTGATAAATTAAACAAATCT
TTTATTAAAGGAGAATAAAA

Downstream 100 bases:

>100_bases
TATACTATATACTTAATTTGTTAATGTACATATACAAATATTATATTCATAAATTAGTTATTAAAGGACATTAAAAAAAT
ATGTTAATTAAACCCGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Putative PTS system EIIB component

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MQNLNNKQKTLIIFLGIITFGIFIIYFFTKAKKVSQIRNTHLIVSSNIPFSLNDFYNCIGSKNNLVNVDATINTLKIELK
EINALNNEKLKVLGAKGIMCNQTKISIIFGDFCLELKELIKKDLFS

Sequences:

>Translated_126_residues
MQNLNNKQKTLIIFLGIITFGIFIIYFFTKAKKVSQIRNTHLIVSSNIPFSLNDFYNCIGSKNNLVNVDATINTLKIELK
EINALNNEKLKVLGAKGIMCNQTKISIIFGDFCLELKELIKKDLFS
>Mature_126_residues
MQNLNNKQKTLIIFLGIITFGIFIIYFFTKAKKVSQIRNTHLIVSSNIPFSLNDFYNCIGSKNNLVNVDATINTLKIELK
EINALNNEKLKVLGAKGIMCNQTKISIIFGDFCLELKELIKKDLFS

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane

COG id: COG1264

COG function: function code G; Phosphotransferase system IIB components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG129 and M.pneumoniae MPN268

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y178_UREPA (Q9PQW5)

Other databases:

- EMBL:   AF222894
- RefSeq:   NP_078010.1
- ProteinModelPortal:   Q9PQW5
- SMR:   Q9PQW5
- GeneID:   875844
- GenomeReviews:   AF222894_GR
- KEGG:   uur:UU178
- HOGENOM:   HBG734372
- OMA:   DQFINIL
- ProtClustDB:   CLSK2298814
- BioCyc:   UURE95667:UU178-MONOMER
- BRENDA:   2.7.1.69
- InterPro:   IPR001996
- Gene3D:   G3DSA:3.30.1360.60

Pfam domain/function: SSF55604 PTS_EIIB

EC number: =2.7.1.69

Molecular weight: Translated: 14318; Mature: 14318

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS51098 PTS_EIIB_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x946d1a8)-;

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLNNKQKTLIIFLGIITFGIFIIYFFTKAKKVSQIRNTHLIVSSNIPFSLNDFYNCIG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHC
SKNNLVNVDATINTLKIELKEINALNNEKLKVLGAKGIMCNQTKISIIFGDFCLELKELI
CCCCEEEECEEEEEEEEEEECCCCCCCCEEEEEECCCEEECCEEEEEEEHHHHHHHHHHH
KKDLFS
HHHCCH
>Mature Secondary Structure
MQNLNNKQKTLIIFLGIITFGIFIIYFFTKAKKVSQIRNTHLIVSSNIPFSLNDFYNCIG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHC
SKNNLVNVDATINTLKIELKEINALNNEKLKVLGAKGIMCNQTKISIIFGDFCLELKELI
CCCCEEEECEEEEEEEEEEECCCCCCCCEEEEEECCCEEECCEEEEEEEHHHHHHHHHHH
KKDLFS
HHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11048724